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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107957458   autophagy-related protein 18c 
 ath-u.5   ATG18C   autophagy-like protein 
 ath-u.5   ATG18D   autophagy 18 D-like protein 
 gma-u.5   100817377   autophagy-related protein 18c 
 gma-u.5   100817169   autophagy-related protein 18c 
 vvi-u.5   100248334   autophagy-related protein 18c 
 ppo-u.5   18108357   autophagy-related protein 18c 
 mtr-u.5   25489798   autophagy-related protein 18d 
 sly-u.5   101246636   autophagy-related protein 18d 
 osa-u.5   4325192   autophagy-related protein 18d 
 zma-u.5   100501577   Autophagy-related protein 18c 
 zma-u.5   100501634   Autophagy-related protein 18c 

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Top 50 coexpressed genes to 107957458 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107957458 (ghi-r.1 coexpression data)

CoexMap"107957458"


ghiLOC107957458 | Entrez gene ID : 107957458    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 2 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0034497 [list] [network] protein localization to phagophore assembly site  (22 genes)  IEA  
GO:0044804 [list] [network] nucleophagy  (36 genes)  IEA  
GO:0000422 [list] [network] autophagy of mitochondrion  (40 genes)  IEA  
GO:0006497 [list] [network] protein lipidation  (71 genes)  IEA  
GO CC
GO:0034045 [list] [network] phagophore assembly site membrane  (16 genes)  IEA  
GO:0019898 [list] [network] extrinsic component of membrane  (68 genes)  IEA  
GO:0005829 [list] [network] cytosol  (2580 genes)  IEA  
GO MF
GO:0080025 [list] [network] phosphatidylinositol-3,5-bisphosphate binding  (10 genes)  IEA  
GO:0032266 [list] [network] phosphatidylinositol-3-phosphate binding  (18 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016748467.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 2,  cyto_nucl 2,  mito 1  (predict for XP_016748467.1)
Subcellular
localization
TargetP
scret 3,  other 3,  chlo 3  (predict for XP_016748467.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107957458
ath-u.5
for
ATG18C
ath-u.5
for
ATG18D
gma-u.5
for
100817377
gma-u.5
for
100817169
vvi-u.5
for
100248334
ppo-u.5
for
18108357
mtr-u.5
for
25489798
sly-u.5
for
101246636
osa-u.5
for
4325192
zma-u.5
for
100501577
zma-u.5
for
100501634


Ortholog ID: 7960
Species ghi ghi ath ath bra bra bna bna cit gma gma vvi ppo mtr sly sot nta nta osa zma zma tae tae hvu sbi bdi
Symbol LOC107904861 LOC107957458 ATG18D ATG18C LOC103841551 LOC103865844 LOC106391623 LOC106368082 LOC102624915 LOC100817169 LOC100817377 LOC100248334 LOC18108357 LOC25489798 LOC101246636 LOC102585303 LOC107783022 LOC107804650 LOC4325192 LOC100501577 LOC100501634 LOC123060283 LOC123068795 LOC123442817 LOC8056558 LOC104582498
Function* autophagy-related protein 18c autophagy-related protein 18c autophagy 18 D-like protein autophagy-like protein autophagy-related protein 18d autophagy-related protein 18c autophagy-related protein 18c autophagy-related protein 18d autophagy-related protein 18c autophagy-related protein 18c autophagy-related protein 18c autophagy-related protein 18c autophagy-related protein 18c autophagy-related protein 18d autophagy-related protein 18d autophagy-related protein 18c-like autophagy-related protein 18d-like autophagy-related protein 18d autophagy-related protein 18d Autophagy-related protein 18c Autophagy-related protein 18c autophagy-related protein 18d autophagy-related protein 18d autophagy-related protein 18d-like autophagy-related protein 18d autophagy-related protein 18d
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00520 Amino sugar and nucleotide sugar metabolism 2
bra04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04517 IgSF CAM signaling 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 2
zma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 3
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
bdi00071 Fatty acid degradation 2
bdi00592 alpha-Linolenic acid metabolism 2
bdi01212 Fatty acid metabolism 2
bdi01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107904861 107957458 824811 818678 103841551 103865844 106391623 106368082 102624915 100817169 100817377 100248334 18108357 25489798 101246636 102585303 107783022 107804650 4325192 100501577 100501634 123060283 123068795 123442817 8056558 104582498
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