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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   ATG18C   autophagy-like protein 
 ath-r.7   ATG18C   autophagy-like protein 
 ath-m.9   ATG18C   autophagy-like protein 
 ath-e.2   ATG18C   autophagy-like protein 
 ath-m.4.bio   ATG18C   autophagy-like protein 
 ath-m.4.hor   ATG18C   autophagy-like protein 
 ath-m.4.lig   ATG18C   autophagy-like protein 
 ath-m.4.str   ATG18C   autophagy-like protein 
 ath-m.4.tis   ATG18C   autophagy-like protein 
 ath-u.5   ATG18D   autophagy 18 D-like protein 
 bra-r.6   103865844   autophagy-related protein 18c 
 bra-r.6   103841551   autophagy-related protein 18d 
 bna-r.1   106367981   autophagy-related protein 18d 
 bna-r.1   106431077   autophagy-related protein 18c 
 bna-r.1   106368082   autophagy-related protein 18d 
 ghi-r.1   107904861   autophagy-related protein 18c 
 ghi-r.1   107957458   autophagy-related protein 18c 
 cit-r.1   102624915   autophagy-related protein 18c 
 gma-u.5   100817377   autophagy-related protein 18c 
 gma-u.5   100817169   autophagy-related protein 18c 
 vvi-u.5   100248334   autophagy-related protein 18c 
 ppo-u.5   18108357   autophagy-related protein 18c 
 mtr-u.5   25489798   autophagy-related protein 18d 
 sly-u.5   101246636   autophagy-related protein 18d 
 sot-r.1   102585303   autophagy-related protein 18c-like 
 nta-r.1   107783022   autophagy-related protein 18d-like 
 nta-r.1   107804650   autophagy-related protein 18d 
 osa-u.5   4325192   autophagy-related protein 18d 
 zma-u.5   100501577   Autophagy-related protein 18c 
 zma-u.5   100501634   Autophagy-related protein 18c 
 tae-r.2   123077300   autophagy-related protein 18d 
 tae-r.2   123068795   autophagy-related protein 18d 
 tae-r.2   123060283   autophagy-related protein 18d 
 hvu-r.1   123442817   autophagy-related protein 18d-like 
 sbi-r.1   8056558   autophagy-related protein 18d 
 bdi-r.1   104582498   autophagy-related protein 18d 

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Top 50 coexpressed genes to ATG18C (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ATG18C (ath-u.5 coexpression data)

CoexMap"818678"


athATG18C | Entrez gene ID : 818678      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 2 3 2 1 2 1 1 1 1 1 2 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
Protein NP_001324652.1 [sequence] [blastp]
NP_181613.2 [sequence] [blastp]
NP_973650.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  cyto 1,  extr 1,  vacu 1,  chlo_mito 1  (predict for NP_001324652.1)
nucl 5,  chlo 2,  cyto 1,  extr 1,  vacu 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_181613.2)
nucl 5,  chlo 2,  cyto 1,  extr 1,  vacu 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_973650.1)
Subcellular
localization
TargetP
other 5  (predict for NP_001324652.1)
other 5,  chlo 3  (predict for NP_181613.2)
other 5,  chlo 3  (predict for NP_973650.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
ATG18C
ath-r.7
for
ATG18C
ath-m.9
for
ATG18C
ath-e.2
for
ATG18C
ath-m.4.bio
for
ATG18C
ath-m.4.hor
for
ATG18C
ath-m.4.lig
for
ATG18C
ath-m.4.str
for
ATG18C
ath-m.4.tis
for
ATG18C
ath-u.5
for
ATG18D
bra-r.6
for
103865844
bra-r.6
for
103841551
bna-r.1
for
106367981
bna-r.1
for
106431077
bna-r.1
for
106368082
ghi-r.1
for
107904861
ghi-r.1
for
107957458
cit-r.1
for
102624915
gma-u.5
for
100817377
gma-u.5
for
100817169
vvi-u.5
for
100248334
ppo-u.5
for
18108357
mtr-u.5
for
25489798
sly-u.5
for
101246636
sot-r.1
for
102585303
nta-r.1
for
107783022
nta-r.1
for
107804650
osa-u.5
for
4325192
zma-u.5
for
100501577
zma-u.5
for
100501634
tae-r.2
for
123077300
tae-r.2
for
123068795
tae-r.2
for
123060283
hvu-r.1
for
123442817
sbi-r.1
for
8056558
bdi-r.1
for
104582498


Ortholog ID: 7960
Species ath ath bra bra bna bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol ATG18C ATG18D LOC103865844 LOC103841551 LOC106431077 LOC106368082 LOC106391623 LOC107904861 LOC107957458 LOC102624915 LOC100817377 LOC100817169 LOC100248334 LOC18108357 LOC25489798 LOC101246636 LOC102585303 LOC107783022 LOC107804650 LOC4325192 LOC100501577 LOC100501634 LOC123077300 LOC123068795 LOC123060283 LOC123442817 LOC8056558 LOC104582498
Function* autophagy-like protein autophagy 18 D-like protein autophagy-related protein 18c autophagy-related protein 18d autophagy-related protein 18c autophagy-related protein 18d autophagy-related protein 18c autophagy-related protein 18c autophagy-related protein 18c autophagy-related protein 18c autophagy-related protein 18c autophagy-related protein 18c autophagy-related protein 18c autophagy-related protein 18c autophagy-related protein 18d autophagy-related protein 18d autophagy-related protein 18c-like autophagy-related protein 18d-like autophagy-related protein 18d autophagy-related protein 18d Autophagy-related protein 18c Autophagy-related protein 18c autophagy-related protein 18d autophagy-related protein 18d autophagy-related protein 18d autophagy-related protein 18d-like autophagy-related protein 18d autophagy-related protein 18d
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00520 Amino sugar and nucleotide sugar metabolism 2
bra04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04517 IgSF CAM signaling 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 2
zma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 3
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
bdi00071 Fatty acid degradation 2
bdi00592 alpha-Linolenic acid metabolism 2
bdi01212 Fatty acid metabolism 2
bdi01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818678 824811 103865844 103841551 106431077 106368082 106391623 107904861 107957458 102624915 100817377 100817169 100248334 18108357 25489798 101246636 102585303 107783022 107804650 4325192 100501577 100501634 123077300 123068795 123060283 123442817 8056558 104582498
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