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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1  107958186  U-box domain-containing protein 4 
 ghi-r.1  107930611  U-box domain-containing protein 4 
 ghi-r.1  107957915  U-box domain-containing protein 4 
 ghi-r.1  121218186  U-box domain-containing protein 4 
 ath-u.5  AT3G01400  ARM repeat superfamily protein 
 ath-u.5  AT5G58680  ARM repeat superfamily protein 
 bra-r.6  103858914  U-box domain-containing protein 4 
 bra-r.6  103851628  U-box domain-containing protein 4-like 
 bra-r.6  103850072  U-box domain-containing protein 4 
 bna-r.1  111211384  U-box domain-containing protein 4-like 
 bna-r.1  125581497  U-box domain-containing protein 4-like 
 bna-r.1  106438897  U-box domain-containing protein 4-like 
 cit-r.1  102624578  U-box domain-containing protein 4-like 
 gma-u.5  100797550  U-box domain-containing protein 4 
 gma-u.5  100796050  U-box domain-containing protein 4 
 gma-u.5  100782449  U-box domain-containing protein 4 
 vvi-u.5  100252212  U-box domain-containing protein 4 
 ppo-u.5  7472660  U-box domain-containing protein 4 
 ppo-u.5  7497328  U-box domain-containing protein 4 
 mtr-u.5  11419168  U-box domain-containing protein 4 
 mtr-u.5  25489958  U-box domain-containing protein 4 
 sly-u.5  101255973  U-box domain-containing protein 4 
 sly-u.5  101259536  U-box domain-containing protein 4 
 sot-r.1  102590450  U-box domain-containing protein 4-like 
 sot-r.1  102590611  U-box domain-containing protein 4-like 
 nta-r.1  107769411  U-box domain-containing protein 4-like 
 nta-r.1  107816949  U-box domain-containing protein 4 
 nta-r.1  107795874  uncharacterized LOC107795874 
 osa-u.5  4343758  U-box domain-containing protein 4 
 zma-u.5  100281873  exodeoxyribonuclease V 
 zma-u.5  100382031  uncharacterized LOC100382031 
 tae-r.2  123044376  U-box domain-containing protein 4 
 tae-r.2  123188158  U-box domain-containing protein 4 
 tae-r.2  123052240  U-box domain-containing protein 4 
 hvu-r.1  123425494  U-box domain-containing protein 4 
 sbi-r.1  8058381  U-box domain-containing protein 4 
 bdi-r.1  100830186  U-box domain-containing protein 4 

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Top 50 coexpressed genes to 107958186 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107958186 (ghi-r.1 coexpression data)

CoexMap"107958186"


ghiLOC107958186 | Entrez gene ID : 107958186
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 1 3 1 2 2 2 2 3 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016749362.2 [sequence] [blastp]
Subcellular
localization
wolf
golg 3,  cyto 2,  pero 1,  cyto_nucl 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_016749362.2)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for XP_016749362.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ghi-r.1
for
107958186


ghi-r.1
for
107930611


ghi-r.1
for
107957915


ghi-r.1
for
121218186


ath-u.5
for
AT3G01400


ath-u.5
for
AT5G58680


bra-r.6
for
103858914


bra-r.6
for
103851628


bra-r.6
for
103850072


bna-r.1
for
111211384


bna-r.1
for
125581497


bna-r.1
for
106438897


cit-r.1
for
102624578


gma-u.5
for
100797550


gma-u.5
for
100796050


gma-u.5
for
100782449


vvi-u.5
for
100252212


ppo-u.5
for
7472660


ppo-u.5
for
7497328


mtr-u.5
for
11419168


mtr-u.5
for
25489958


sly-u.5
for
101255973


sly-u.5
for
101259536


sot-r.1
for
102590450


sot-r.1
for
102590611


nta-r.1
for
107769411


nta-r.1
for
107816949


nta-r.1
for
107795874


osa-u.5
for
4343758


zma-u.5
for
100281873


zma-u.5
for
100382031


tae-r.2
for
123044376


tae-r.2
for
123188158


tae-r.2
for
123052240


hvu-r.1
for
123425494


sbi-r.1
for
8058381


bdi-r.1
for
100830186



Ortholog ID: 4554
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit gma gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC107958186 LOC107957915 LOC121218186 AT3G01400 AT5G58680 LOC103858914 LOC103851628 LOC103850072 LOC111211384 LOC106384133 LOC106388084 LOC102624578 LOC100797550 LOC100796050 LOC100782449 LOC100252212 LOC7472660 LOC7497328 LOC11419168 LOC25489958 LOC101255973 LOC101259536 LOC102590450 LOC102590611 LOC107769411 LOC107795874 LOC107802448 LOC4343758 LOC100281873 LOC100382031 LOC123044376 LOC123188158 LOC123052240 LOC123425494 LOC8058381 LOC100830186
Function* U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 ARM repeat superfamily protein ARM repeat superfamily protein U-box domain-containing protein 4 U-box domain-containing protein 4-like U-box domain-containing protein 4 U-box domain-containing protein 4-like U-box domain-containing protein 4-like U-box domain-containing protein 4-like U-box domain-containing protein 4-like U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4-like U-box domain-containing protein 4-like U-box domain-containing protein 4-like uncharacterized LOC107795874 uncharacterized LOC107802448 U-box domain-containing protein 4 exodeoxyribonuclease V uncharacterized LOC100382031 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 2
ghi04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 2
ghi04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 2
ghi04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00410 beta-Alanine metabolism 2
bra00770 Pantothenate and CoA biosynthesis 2
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 5
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03272 Virion - Hepatitis viruses 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00600 Sphingolipid metabolism 2
sot04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 11
nta00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107958186 107957915 121218186 821320 835982 103858914 103851628 103850072 111211384 106384133 106388084 102624578 100797550 100796050 100782449 100252212 7472660 7497328 11419168 25489958 101255973 101259536 102590450 102590611 107769411 107795874 107802448 4343758 100281873 100382031 123044376 123188158 123052240 123425494 8058381 100830186
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