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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7497328   U-box domain-containing protein 4 
 ppo-r.4   7497328   U-box domain-containing protein 4 
 ppo-m.4   7497328   U-box domain-containing protein 4 
 ppo-u.5   7472660   U-box domain-containing protein 4 
 gma-u.5   100796050   U-box domain-containing protein 4 
 gma-u.5   100797550   U-box domain-containing protein 4 
 gma-u.5   100782449   U-box domain-containing protein 4 
 mtr-u.5   25489958   U-box domain-containing protein 4 
 mtr-u.5   11419168   U-box domain-containing protein 4 
 ath-u.5   AT3G01400   ARM repeat superfamily protein 
 ath-u.5   AT5G58680   ARM repeat superfamily protein 
 vvi-u.5   100252212   U-box domain-containing protein 4 
 sly-u.5   101255973   U-box domain-containing protein 4 
 sly-u.5   101259536   U-box domain-containing protein 4 
 osa-u.5   4343758   U-box domain-containing protein 4 
 zma-u.5   100281873   exodeoxyribonuclease V 
 zma-u.5   100382031   uncharacterized LOC100382031 

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Top 50 coexpressed genes to 7497328 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7497328 (ppo-u.5 coexpression data)

CoexMap"7497328"


ppoLOC7497328 | Entrez gene ID : 7497328    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 3 2 2 1 2 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (6111 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002320032.2 [sequence] [blastp]
XP_052302674.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 3,  mito 2,  pero 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_002320032.2)
nucl 3,  cyto_nucl 2,  chlo 2,  mito 2,  chlo_mito 2  (predict for XP_052302674.1)
Subcellular
localization
TargetP
other 6,  chlo 4  (predict for XP_002320032.2)
other 6,  chlo 4  (predict for XP_052302674.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7497328

.
ppo-r.4
for
7497328

.
ppo-m.4
for
7497328

.
ppo-u.5
for
7472660

.
gma-u.5
for
100796050

.
gma-u.5
for
100797550

.
gma-u.5
for
100782449

.
mtr-u.5
for
25489958

.
mtr-u.5
for
11419168

.
ath-u.5
for
AT3G01400

.
ath-u.5
for
AT5G58680

.
vvi-u.5
for
100252212

.
sly-u.5
for
101255973

.
sly-u.5
for
101259536

.
osa-u.5
for
4343758

.
zma-u.5
for
100281873

.
zma-u.5
for
100382031

.


Ortholog ID: 4554
Species ath ath gma gma sly sly osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot sot cit bdi nta nta
Symbol AT3G01400 AT5G58680 LOC100797550 LOC100782449 LOC101259536 LOC101255973 LOC4343758 LOC100281873 LOC100382031 LOC103850072 LOC103851628 LOC100252212 LOC7472660 LOC7497328 LOC11419168 LOC25489958 LOC123044376 LOC123188158 LOC123425494 LOC121218186 LOC107957915 LOC106384133 LOC106388084 LOC8058381 LOC102590611 LOC102590450 LOC102624578 LOC100830186 LOC107769411 LOC107802448
Function* ARM repeat superfamily protein ARM repeat superfamily protein U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 exodeoxyribonuclease V uncharacterized LOC100382031 U-box domain-containing protein 4 U-box domain-containing protein 4-like U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4-like U-box domain-containing protein 4-like U-box domain-containing protein 4 U-box domain-containing protein 4-like U-box domain-containing protein 4-like U-box domain-containing protein 4-like U-box domain-containing protein 4 U-box domain-containing protein 4-like uncharacterized LOC107802448
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00410 beta-Alanine metabolism 2
bra00770 Pantothenate and CoA biosynthesis 2
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 5
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 2
ghi04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 2
ghi04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00600 Sphingolipid metabolism 2
sot04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03272 Virion - Hepatitis viruses 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 11
nta00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821320 835982 100797550 100782449 101259536 101255973 4343758 100281873 100382031 103850072 103851628 100252212 7472660 7497328 11419168 25489958 123044376 123188158 123425494 121218186 107957915 106384133 106388084 8058381 102590611 102590450 102624578 100830186 107769411 107802448
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