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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107958580   DNA repair protein UVH3 
 ghi-r.1   107955581   DNA repair protein UVH3 
 ath-u.5   UVH3   5'-3' exonuclease family protein 
 bra-r.6   103875172   DNA repair protein UVH3 
 bna-r.1   106415222   DNA repair protein UVH3 
 bna-r.1   125575217   DNA repair protein UVH3-like 
 cit-r.1   102606724   DNA repair protein UVH3 
 gma-u.5   100820295   DNA repair protein UVH3 
 vvi-u.5   100245663   DNA repair protein UVH3 
 ppo-u.5   18107274   DNA repair protein UVH3 
 mtr-u.5   25498004   DNA repair protein UVH3 
 sly-u.5   101260299   DNA repair protein UVH3 
 sot-r.1   102586982   DNA repair protein UVH3 
 nta-r.1   107798668   DNA repair protein UVH3 
 nta-r.1   107815615   DNA repair protein UVH3 
 osa-u.5   4331991   DNA repair protein UVH3 
 zma-u.5   103632168   DNA repair protein UVH3 
 tae-r.2   123085004   DNA repair protein UVH3 
 tae-r.2   123093064   DNA repair protein UVH3 
 tae-r.2   123098344   DNA repair protein UVH3 
 hvu-r.1   123449388   DNA repair protein UVH3 
 sbi-r.1   8054227   DNA repair protein UVH3 
 bdi-r.1   100824635   DNA repair protein UVH3 
 cre-r.1   CHLRE_10g429050v5   uncharacterized protein 

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Top 50 coexpressed genes to 107958580 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107958580 (ghi-r.1 coexpression data)

CoexMap"107958580"


ghiLOC107958580 | Entrez gene ID : 107958580    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03420 [list] [network] Nucleotide excision repair (188 genes)
GO BP
GO:0006289 [list] [network] nucleotide-excision repair  (79 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0004520 [list] [network] DNA endonuclease activity  (52 genes)  IEA  
GO:0003697 [list] [network] single-stranded DNA binding  (129 genes)  IEA  
Protein XP_016749879.2 [sequence] [blastp]
XP_016749882.2 [sequence] [blastp]
XP_016749883.2 [sequence] [blastp]
XP_040953944.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_016749879.2)
nucl 10  (predict for XP_016749882.2)
nucl 10  (predict for XP_016749883.2)
nucl 10  (predict for XP_040953944.1)
Subcellular
localization
TargetP
other 7  (predict for XP_016749879.2)
other 8  (predict for XP_016749882.2)
other 6  (predict for XP_016749883.2)
other 8  (predict for XP_040953944.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107958580
ghi-r.1
for
107955581
ath-u.5
for
UVH3
bra-r.6
for
103875172
bna-r.1
for
106415222
bna-r.1
for
125575217
cit-r.1
for
102606724
gma-u.5
for
100820295
vvi-u.5
for
100245663
ppo-u.5
for
18107274
mtr-u.5
for
25498004
sly-u.5
for
101260299
sot-r.1
for
102586982
nta-r.1
for
107798668
nta-r.1
for
107815615
osa-u.5
for
4331991
zma-u.5
for
103632168
tae-r.2
for
123085004
tae-r.2
for
123093064
tae-r.2
for
123098344
hvu-r.1
for
123449388
sbi-r.1
for
8054227
bdi-r.1
for
100824635
cre-r.1
for
CHLRE_10g429050v5


Ortholog ID: 10798
Species ghi ghi ath bra bna bna cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC107958580 LOC107955581 UVH3 LOC103875172 LOC106415222 LOC125575217 LOC102606724 LOC100820295 LOC100245663 LOC18107274 LOC25498004 LOC101260299 LOC102586982 LOC107798668 LOC107815615 LOC4331991 LOC103632168 LOC123085004 LOC123093064 LOC123098344 LOC123449388 LOC8054227 LOC100824635 CHLRE_10g429050v5
Function* DNA repair protein UVH3 DNA repair protein UVH3 5'-3' exonuclease family protein DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3-like DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03440 Homologous recombination 4
bna03450 Non-homologous end-joining 2
bna03420 Nucleotide excision repair 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03440 Homologous recombination 4
bna03450 Non-homologous end-joining 2
bna03420 Nucleotide excision repair 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03420 Nucleotide excision repair 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 3
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 3
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03018 RNA degradation 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 4
bdi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107958580 107955581 822427 103875172 106415222 125575217 102606724 100820295 100245663 18107274 25498004 101260299 102586982 107798668 107815615 4331991 103632168 123085004 123093064 123098344 123449388 8054227 100824635 5728121
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