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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_10g429050v5   uncharacterized protein 
 ath-u.5   UVH3   5'-3' exonuclease family protein 
 gma-u.5   100820295   DNA repair protein UVH3 
 sly-u.5   101260299   DNA repair protein UVH3 
 osa-u.5   4331991   DNA repair protein UVH3 
 zma-u.5   103632168   DNA repair protein UVH3 
 vvi-u.5   100245663   DNA repair protein UVH3 
 ppo-u.5   18107274   DNA repair protein UVH3 
 mtr-u.5   25498004   DNA repair protein UVH3 

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Top 50 coexpressed genes to CHLRE_10g429050v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_10g429050v5 (cre-r.1 coexpression data)

CoexMap"5728121"


creCHLRE_10g429050v5 | Entrez gene ID : 5728121    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006289 [list] [network] nucleotide-excision repair  (28 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0004520 [list] [network] DNA endonuclease activity  (25 genes)  IEA  
GO:0003697 [list] [network] single-stranded DNA binding  (46 genes)  IEA  
Protein XP_042920007.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_042920007.1)
Subcellular
localization
TargetP
other 6  (predict for XP_042920007.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_10g429050v5

.
ath-u.5
for
UVH3

.
gma-u.5
for
100820295

.
sly-u.5
for
101260299

.
osa-u.5
for
4331991

.
zma-u.5
for
103632168

.
vvi-u.5
for
100245663

.
ppo-u.5
for
18107274

.
mtr-u.5
for
25498004

.


Ortholog ID: 10798
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol UVH3 LOC100820295 LOC101260299 LOC4331991 LOC103632168 LOC103875172 LOC100245663 LOC18107274 LOC25498004 LOC123093064 LOC123085004 LOC123449388 LOC107958580 LOC107955581 LOC125575217 LOC106415222 CHLRE_10g429050v5 LOC8054227 LOC102586982 LOC102606724 LOC100824635 LOC107798668 LOC107815615
Function* 5'-3' exonuclease family protein DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3-like DNA repair protein UVH3 uncharacterized protein DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3 DNA repair protein UVH3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03420 Nucleotide excision repair 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 3
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03018 RNA degradation 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03440 Homologous recombination 4
bna03450 Non-homologous end-joining 2
bna03420 Nucleotide excision repair 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03440 Homologous recombination 4
bna03450 Non-homologous end-joining 2
bna03420 Nucleotide excision repair 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 4
bdi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822427 100820295 101260299 4331991 103632168 103875172 100245663 18107274 25498004 123093064 123085004 123449388 107958580 107955581 125575217 106415222 5728121 8054227 102586982 102606724 100824635 107798668 107815615
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