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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107958746   transcription factor bHLH68 
 ath-u.5   AT2G20100   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.5   AT4G29100   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 gma-u.5   100777095   transcription factor bHLH68-like 
 gma-u.5   100785156   transcription factor bHLH68 
 gma-u.5   100786555   transcription factor bHLH68-like 
 vvi-u.5   100249096   transcription factor bHLH68 
 vvi-u.5   100248013   transcription factor bHLH68 
 ppo-u.5   7488103   transcription factor bHLH68 
 ppo-u.5   7483537   transcription factor bHLH68 
 ppo-u.5   7475081   transcription factor bHLH68 
 mtr-u.5   25497378   transcription factor bHLH68 
 mtr-u.5   25502267   transcription factor bHLH68 
 mtr-u.5   11425782   transcription factor bHLH68 
 sly-u.5   101251487   transcription factor bHLH68 
 sly-u.5   101267690   transcription factor bHLH68 
 sly-u.5   101250810   transcription factor bHLH68 
 osa-u.5   4325885   transcription factor bHLH68 
 osa-u.5   4329008   transcription factor bHLH133 
 osa-u.5   4338155   transcription factor bHLH68 
 zma-u.5   100274340   uncharacterized LOC100274340 
 zma-u.5   100216872   uncharacterized LOC100216872 
 zma-u.5   100191589   uncharacterized LOC100191589 

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Top 50 coexpressed genes to 107958746 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107958746 (ghi-r.1 coexpression data)

CoexMap"107958746"


ghiLOC107958746 | Entrez gene ID : 107958746    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 2 3 2 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (1121 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (605 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (729 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (1206 genes)  IEA  
Protein XP_016750084.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 3  (predict for XP_016750084.2)
Subcellular
localization
TargetP
chlo 4  (predict for XP_016750084.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107958746
ath-u.5
for
AT2G20100
ath-u.5
for
AT4G29100
gma-u.5
for
100777095
gma-u.5
for
100785156
gma-u.5
for
100786555
vvi-u.5
for
100249096
vvi-u.5
for
100248013
ppo-u.5
for
7488103
ppo-u.5
for
7483537
ppo-u.5
for
7475081
mtr-u.5
for
25497378
mtr-u.5
for
25502267
mtr-u.5
for
11425782
sly-u.5
for
101251487
sly-u.5
for
101267690
sly-u.5
for
101250810
osa-u.5
for
4325885
osa-u.5
for
4329008
osa-u.5
for
4338155
zma-u.5
for
100274340
zma-u.5
for
100216872
zma-u.5
for
100191589


Ortholog ID: 1566
Species ghi ghi ath ath bra bra bna bna cit cit gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta osa osa zma zma tae hvu hvu sbi sbi bdi bdi
Symbol LOC107901255 LOC107933013 AT4G29100 AT2G20100 LOC103853832 LOC103842612 LOC106358796 LOC106383137 LOC102621228 LOC102627938 LOC100785156 LOC100783401 LOC100249096 LOC100248013 LOC7488103 LOC7475081 LOC25497378 LOC25502267 LOC101251487 LOC101267690 LOC102604321 LOC102605353 LOC107783000 LOC107790948 LOC4329008 LOC4338155 LOC100216872 LOC100191589 LOC123060799 LOC123443260 LOC123427916 LOC8066635 LOC8155296 LOC100840001 LOC100821716
Function* transcription factor bHLH68 transcription factor bHLH68 basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH68 transcription factor bHLH133 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68-like transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68-like transcription factor bHLH68 transcription factor bHLH68 uncharacterized LOC107790948 transcription factor bHLH133 transcription factor bHLH68 uncharacterized LOC100216872 uncharacterized LOC100191589 transcription factor bHLH68 transcription factor bHLH68-like transcription factor bHLH68-like transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH68 transcription factor bHLH133
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 2
tae04075 Plant hormone signal transduction 2
tae00270 Cysteine and methionine metabolism 2
tae00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107901255 107933013 829031 816529 103853832 103842612 106358796 106383137 102621228 102627938 100785156 100783401 100249096 100248013 7488103 7475081 25497378 25502267 101251487 101267690 102604321 102605353 107783000 107790948 4329008 4338155 100216872 100191589 123060799 123443260 123427916 8066635 8155296 100840001 100821716
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