ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107958828	probable flavin-containing monooxygenase 1
ghi-r.1	107925383	probable flavin-containing monooxygenase 1
ghi-r.1	107925374	probable flavin-containing monooxygenase 1
ghi-r.1	107907082	probable flavin-containing monooxygenase 1
ath-u.5	FMO1	flavin-dependent monooxygenase 1
bra-r.6	103835857	probable flavin-containing monooxygenase 1
bna-r.1	106346975	probable flavin-containing monooxygenase 1
bna-r.1	106361959	probable flavin-containing monooxygenase 1
cit-r.1	102620297	probable flavin-containing monooxygenase 1
cit-r.1	102626590	probable flavin-containing monooxygenase 1
gma-u.5	100798440	probable flavin-containing monooxygenase 1
gma-u.5	100811537	probable flavin-containing monooxygenase 1
gma-u.5	100799486	probable flavin-containing monooxygenase 1
vvi-u.5	100243508	probable flavin-containing monooxygenase 1
vvi-u.5	100265831	probable flavin-containing monooxygenase 1
ppo-u.5	18099883	probable flavin-containing monooxygenase 1
mtr-u.5	25488323	probable flavin-containing monooxygenase 1
sly-u.5	101258974	probable flavin-containing monooxygenase 1
sly-u.5	101254646	probable flavin-containing monooxygenase 1
sly-u.5	101254343	probable flavin-containing monooxygenase 1
sot-r.1	102605500	probable flavin-containing monooxygenase 1
sot-r.1	102600780	probable flavin-containing monooxygenase 1
sot-r.1	102581286	probable flavin-containing monooxygenase 1
nta-r.1	107775647	putative flavin-containing monooxygenase 1
nta-r.1	107829572	putative flavin-containing monooxygenase 1
nta-r.1	107828999	putative flavin-containing monooxygenase 1
osa-u.5	4347776	probable flavin-containing monooxygenase 1
osa-u.5	9267722	probable flavin-containing monooxygenase 1
zma-u.5	100193552	uncharacterized LOC100193552
zma-u.5	103648252	probable flavin-containing monooxygenase 1
tae-r.2	123187261	probable flavin-containing monooxygenase 1
hvu-r.1	123451845	probable flavin-containing monooxygenase 1
sbi-r.1	8061539	probable flavin-containing monooxygenase 1
sbi-r.1	8067729	probable flavin-containing monooxygenase 1
bdi-r.1	100841913	probable flavin-containing monooxygenase 1
bdi-r.1	100824028	probable flavin-containing monooxygenase 1
bdi-r.1	100824340	probable flavin-containing monooxygenase 1
cre-r.1	CHLRE_17g731700v5	uncharacterized protein
cre-r.1	CHLRE_16g652750v5	uncharacterized protein
cre-r.1	CHLRE_03g148900v5	uncharacterized protein

Top 50 coexpressed genes to 107958828 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107958828 (ghi-r.1 coexpression data)

CoexMap"107958828"

[Cytoscape]

Annotation

functional annotation

KEGG

ghi00430 [list] [network] Taurine and hypotaurine metabolism (25 genes)

GO BP

GO CC

GO MF

GO:0004499 [list] [network] N,N-dimethylaniline monooxygenase activity	(48 genes)	IEA
GO:0050661 [list] [network] NADP binding	(147 genes)	IEA
GO:0050660 [list] [network] flavin adenine dinucleotide binding	(367 genes)	IEA

Protein

XP_016750210.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, nucl 3, cyto_pero 3

(predict for XP_016750210.1)

Subcellular
localization
TargetP

other 7

(predict for XP_016750210.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107958828	ghi-r.1 for 107925383	ghi-r.1 for 107925374	ghi-r.1 for 107907082	ath-u.5 for FMO1	bra-r.6 for 103835857	bna-r.1 for 106346975	bna-r.1 for 106361959	cit-r.1 for 102620297	cit-r.1 for 102626590	gma-u.5 for 100798440	gma-u.5 for 100811537	gma-u.5 for 100799486	vvi-u.5 for 100243508	vvi-u.5 for 100265831	ppo-u.5 for 18099883	mtr-u.5 for 25488323	sly-u.5 for 101258974	sly-u.5 for 101254646	sly-u.5 for 101254343	sot-r.1 for 102605500	sot-r.1 for 102600780	sot-r.1 for 102581286	nta-r.1 for 107775647	nta-r.1 for 107829572	nta-r.1 for 107828999	osa-u.5 for 4347776	osa-u.5 for 9267722	zma-u.5 for 100193552	zma-u.5 for 103648252	tae-r.2 for 123187261	hvu-r.1 for 123451845	sbi-r.1 for 8061539	sbi-r.1 for 8067729	bdi-r.1 for 100841913	bdi-r.1 for 100824028	bdi-r.1 for 100824340	cre-r.1 for CHLRE_17g731700v5	cre-r.1 for CHLRE_16g652750v5	cre-r.1 for CHLRE_03g148900v5

Ortholog

Ortholog ID: 235

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

FMO1

Function^*

probable flavin-containing monooxygenase 1

flavin-dependent monooxygenase 1

probable flavin-containing monooxygenase 1

putative flavin-containing monooxygenase 1

probable flavin-containing monooxygenase 1

uncharacterized LOC100193552

probable flavin-containing monooxygenase 1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00910	Nitrogen metabolism	3
ghi00430	Taurine and hypotaurine metabolism	2
ghi00999	Biosynthesis of various plant secondary metabolites	2
ghi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00910	Nitrogen metabolism	3
ghi00430	Taurine and hypotaurine metabolism	2
ghi00999	Biosynthesis of various plant secondary metabolites	2
ghi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00430	Taurine and hypotaurine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00430	Taurine and hypotaurine metabolism	6
bna00300	Lysine biosynthesis	2
bna01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00430	Taurine and hypotaurine metabolism	6
bna00300	Lysine biosynthesis	2
bna01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00100	Steroid biosynthesis	2
gma00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00430	Taurine and hypotaurine metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00430	Taurine and hypotaurine metabolism	5
vvi00943	Isoflavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00430	Taurine and hypotaurine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00430	Taurine and hypotaurine metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00062	Fatty acid elongation	2
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00430	Taurine and hypotaurine metabolism	2
sly00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00430	Taurine and hypotaurine metabolism	5
sot00561	Glycerolipid metabolism	3
sot00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00430	Taurine and hypotaurine metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00430	Taurine and hypotaurine metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00430	Taurine and hypotaurine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00430	Taurine and hypotaurine metabolism	6
nta01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00430	Taurine and hypotaurine metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00430	Taurine and hypotaurine metabolism	2
osa04712	Circadian rhythm - plant	2
osa00730	Thiamine metabolism	2
osa01240	Biosynthesis of cofactors	2
osa04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04712	Circadian rhythm - plant	4
osa00430	Taurine and hypotaurine metabolism	2
osa00730	Thiamine metabolism	2
osa01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00940	Phenylpropanoid biosynthesis	3
zma04016	MAPK signaling pathway - plant	2
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00430	Taurine and hypotaurine metabolism	6
tae02010	ABC transporters	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00430	Taurine and hypotaurine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00430	Taurine and hypotaurine metabolism	6
tae02010	ABC transporters	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00350	Tyrosine metabolism	6
hvu00360	Phenylalanine metabolism	6
hvu00380	Tryptophan metabolism	6
hvu00901	Indole alkaloid biosynthesis	6
hvu00950	Isoquinoline alkaloid biosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00330	Arginine and proline metabolism	3
sbi00360	Phenylalanine metabolism	3
sbi00380	Tryptophan metabolism	3
sbi00350	Tyrosine metabolism	2
sbi00950	Isoquinoline alkaloid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00430	Taurine and hypotaurine metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

107958828

107907082

838508

103835857

106361959

106397714

102620297

102626590

100811537

100812619

100243508

100260613

100248597

7485465

120578057

101254343

101254042

102600780

102581286

102605841

107828999

107809551

107765266

9267722

4335203

100193552

103629978

123167772

123166749

123162631

123410736

8061539

8081189

100824340

5723705

5717049

5717012

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Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	1	1	2	2	3	2	1	1	3	3	3	2	2	1	1	2	3	3

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107958828 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107958828 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**