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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107958833   auxin response factor 19 
 ath-u.5   NPH4   Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein 
 ath-u.5   ARF19   auxin response factor 19 
 gma-u.5   100805456   auxin response factor 19 
 gma-u.5   100804628   auxin response factor 19 
 gma-u.5   100816054   auxin response factor 19 
 vvi-u.5   100257618   auxin response factor 7 
 ppo-u.5   18100300   auxin response factor 19 
 ppo-u.5   7467924   auxin response factor 19 
 mtr-u.5   25486537   auxin response factor 19 
 mtr-u.5   11445778   auxin response factor 19 
 sly-u.5   ARF7   auxin response factor 19 
 osa-u.5   9270361   auxin response factor 16-like 
 zma-u.5   103637942   auxin response factor 16 

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Top 50 coexpressed genes to 107958833 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107958833 (ghi-r.1 coexpression data)

CoexMap"107958833"


ghiLOC107958833 | Entrez gene ID : 107958833    
Species ghi ath gma vvi ppo mtr sly osa zma hvu bna cit bra sbi bdi nta tae cre sot
Paralog 1 2 3 1 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009725 [list] [network] response to hormone  (1008 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0003677 [list] [network] DNA binding  (4831 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016750216.2 [sequence] [blastp]
XP_016750217.2 [sequence] [blastp]
XP_016750218.2 [sequence] [blastp]
XP_040968820.1 [sequence] [blastp]
XP_040968821.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  cysk 1  (predict for XP_016750216.2)
nucl 9,  cyto 1,  cysk 1  (predict for XP_016750217.2)
nucl 9,  cyto 1,  cysk 1  (predict for XP_016750218.2)
nucl 9,  cyto 1,  cysk 1  (predict for XP_040968820.1)
nucl 9,  cyto 1,  cysk 1  (predict for XP_040968821.1)
Subcellular
localization
TargetP
other 7,  chlo 4  (predict for XP_016750216.2)
other 7,  chlo 4  (predict for XP_016750217.2)
other 7,  chlo 4  (predict for XP_016750218.2)
other 7,  chlo 4  (predict for XP_040968820.1)
other 7,  chlo 4  (predict for XP_040968821.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107958833
ath-u.5
for
NPH4
ath-u.5
for
ARF19
gma-u.5
for
100805456
gma-u.5
for
100804628
gma-u.5
for
100816054
vvi-u.5
for
100257618
ppo-u.5
for
18100300
ppo-u.5
for
7467924
mtr-u.5
for
25486537
mtr-u.5
for
11445778
sly-u.5
for
ARF7
osa-u.5
for
9270361
zma-u.5
for
103637942


Ortholog ID: 4788
Species ghi ghi ath ath bra bra bna bna cit gma gma vvi ppo ppo mtr mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC107907087 LOC107958833 ARF19 NPH4 ARF7-1 ARF7-2 LOC106401590 LOC106361960 LOC102628827 LOC100804628 LOC100805456 LOC100257618 LOC18100300 LOC7467924 LOC11445778 LOC25486537 ARF7 LOC102594021 LOC107822108 LOC107831276 LOC9270361 LOC103637942 LOC123163008 LOC123163801 LOC123406960 LOC8065457 LOC100838160
Function* auxin response factor 19 auxin response factor 19 auxin response factor 19 Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein auxin response factor 7 auxin response factor 7 auxin response factor 19 auxin response factor 19 auxin response factor 19-like auxin response factor 19 auxin response factor 19 auxin response factor 7 auxin response factor 19 auxin response factor 19 auxin response factor 19 auxin response factor 19 auxin response factor 19 auxin response factor 7-like auxin response factor 19 auxin response factor 19 auxin response factor 16-like auxin response factor 16 auxin response factor 16 auxin response factor 16 auxin response factor 16 auxin response factor 16 auxin response factor 16
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 5
ath03083 Polycomb repressive complex 3
ath03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 5
ath04142 Lysosome 3
ath05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00562 Inositol phosphate metabolism 3
bra04070 Phosphatidylinositol signaling system 3
bra04144 Endocytosis 3
bra04142 Lysosome 3
bra05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 3
cit03040 Spliceosome 2
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 7
mtr04120 Ubiquitin mediated proteolysis 2
mtr00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00100 Steroid biosynthesis 2
osa00071 Fatty acid degradation 2
osa01212 Fatty acid metabolism 2
osa00600 Sphingolipid metabolism 2
osa04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 9
zma00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107907087 107958833 838505 832196 103845646 103851373 106401590 106361960 102628827 100804628 100805456 100257618 18100300 7467924 11445778 25486537 100191131 102594021 107822108 107831276 9270361 103637942 123163008 123163801 123406960 8065457 100838160
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