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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107958931   cytochrome c oxidase assembly factor 6 
 ghi-r.1   107906908   cytochrome c oxidase assembly factor 6 
 ath-u.5   AT5G58005   Cytochrome c oxidase, subunit Vib family protein 
 bra-r.6   103856718   cytochrome c oxidase assembly factor 6 
 bna-r.1   106443243   cytochrome c oxidase assembly factor 6 
 bna-r.1   106385194   cytochrome c oxidase assembly factor 6-like 
 bna-r.1   125599337   cytochrome c oxidase assembly factor 6-like 
 cit-r.1   102625714   cytochrome c oxidase assembly factor 6 
 gma-u.5   100780570   uncharacterized LOC100780570 
 vvi-u.5   100255296   uncharacterized LOC100255296 
 ppo-u.5   7465951   cytochrome c oxidase subunit 6B-like protein new16 
 ppo-u.5   7493402   cytochrome c oxidase subunit 6B-like protein new16 
 mtr-u.5   11437300   uncharacterized LOC11437300 
 sly-u.5   101263329   uncharacterized LOC101263329 
 sly-u.5   101244345   uncharacterized LOC101244345 
 sot-r.1   102591353   uncharacterized LOC102591353 
 sot-r.1   102592534   uncharacterized LOC102592534 
 nta-r.1   107817148   uncharacterized LOC107817148 
 nta-r.1   107786851   uncharacterized LOC107786851 
 nta-r.1   107783785   uncharacterized LOC107783785 
 osa-u.5   4345688   uncharacterized LOC4345688 
 zma-u.5   100276300   Cytochrome c oxidase subunit Vib family protein 
 tae-r.2   123158099   uncharacterized LOC123158099 
 tae-r.2   123165698   uncharacterized LOC123165698 
 tae-r.2   123151659   uncharacterized LOC123151659 
 hvu-r.1   123411946   uncharacterized LOC123411946 
 sbi-r.1   8080607   uncharacterized LOC8080607 
 bdi-r.1   100833101   uncharacterized LOC100833101 
 cre-r.1   CHLRE_10g466000v5   uncharacterized protein 

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Top 50 coexpressed genes to 107958931 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107958931 (ghi-r.1 coexpression data)

CoexMap"107958931"


ghiLOC107958931 | Entrez gene ID : 107958931    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 3 1 1 1 2 1 2 2 3 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0045277 [list] [network] respiratory chain complex IV  (12 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (1525 genes)  IEA  
GO MF
Protein XP_016750336.1 [sequence] [blastp]
XP_040968901.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 2  (predict for XP_016750336.1)
chlo 4,  mito 4,  nucl 1  (predict for XP_040968901.1)
Subcellular
localization
TargetP
other 7  (predict for XP_016750336.1)
other 8  (predict for XP_040968901.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107958931
ghi-r.1
for
107906908
ath-u.5
for
AT5G58005
bra-r.6
for
103856718
bna-r.1
for
106443243
bna-r.1
for
106385194
bna-r.1
for
125599337
cit-r.1
for
102625714
gma-u.5
for
100780570
vvi-u.5
for
100255296
ppo-u.5
for
7465951
ppo-u.5
for
7493402
mtr-u.5
for
11437300
sly-u.5
for
101263329
sly-u.5
for
101244345
sot-r.1
for
102591353
sot-r.1
for
102592534
nta-r.1
for
107817148
nta-r.1
for
107786851
nta-r.1
for
107783785
osa-u.5
for
4345688
zma-u.5
for
100276300
tae-r.2
for
123158099
tae-r.2
for
123165698
tae-r.2
for
123151659
hvu-r.1
for
123411946
sbi-r.1
for
8080607
bdi-r.1
for
100833101
cre-r.1
for
CHLRE_10g466000v5


Ortholog ID: 7767
Species ghi ghi ath bra bna bna bna cit gma vvi ppo ppo mtr sly sly sot sot nta nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC107958931 LOC107906908 AT5G58005 LOC103856718 LOC106443243 LOC106385194 LOC125599337 LOC102625714 LOC100780570 LOC100255296 LOC7465951 LOC7493402 LOC11437300 LOC101263329 LOC101244345 LOC102591353 LOC102592534 LOC107786851 LOC107783785 LOC107769447 LOC4345688 LOC100276300 LOC123158099 LOC123165698 LOC123151659 LOC123411946 LOC8080607 LOC100833101 CHLRE_10g466000v5
Function* cytochrome c oxidase assembly factor 6 cytochrome c oxidase assembly factor 6 Cytochrome c oxidase, subunit Vib family protein cytochrome c oxidase assembly factor 6 cytochrome c oxidase assembly factor 6 cytochrome c oxidase assembly factor 6-like cytochrome c oxidase assembly factor 6-like cytochrome c oxidase assembly factor 6 uncharacterized LOC100780570 uncharacterized LOC100255296 cytochrome c oxidase subunit 6B-like protein new16 cytochrome c oxidase subunit 6B-like protein new16 uncharacterized LOC11437300 uncharacterized LOC101263329 uncharacterized LOC101244345 uncharacterized LOC102591353 uncharacterized LOC102592534 uncharacterized LOC107786851 uncharacterized LOC107783785 uncharacterized LOC107769447 uncharacterized LOC4345688 Cytochrome c oxidase subunit Vib family protein uncharacterized LOC123158099 uncharacterized LOC123165698 uncharacterized LOC123151659 uncharacterized LOC123411946 uncharacterized LOC8080607 uncharacterized LOC100833101 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 9
ghi03083 Polycomb repressive complex 5
ghi04141 Protein processing in endoplasmic reticulum 5
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 6
ghi03083 Polycomb repressive complex 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 4
bra03083 Polycomb repressive complex 3
bra04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 5
bna04136 Autophagy - other 4
bna00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 3
bna04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 3
bna00620 Pyruvate metabolism 3
bna04120 Ubiquitin mediated proteolysis 3
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 6
cit00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 3
ppo03018 RNA degradation 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03060 Protein export 3
sly04141 Protein processing in endoplasmic reticulum 2
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 4
sot03020 RNA polymerase 2
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 3
nta03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 5
osa00020 Citrate cycle (TCA cycle) 2
osa01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 7
zma04141 Protein processing in endoplasmic reticulum 4
zma03420 Nucleotide excision repair 3
zma04120 Ubiquitin mediated proteolysis 3
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00510 N-Glycan biosynthesis 4
tae00513 Various types of N-glycan biosynthesis 4
tae04141 Protein processing in endoplasmic reticulum 4
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 8
hvu00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 4
sbi04141 Protein processing in endoplasmic reticulum 4
sbi03083 Polycomb repressive complex 3
sbi03018 RNA degradation 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03083 Polycomb repressive complex 3
bdi04120 Ubiquitin mediated proteolysis 3
bdi04141 Protein processing in endoplasmic reticulum 3
bdi00190 Oxidative phosphorylation 3
bdi03050 Proteasome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107958931 107906908 835912 103856718 106443243 106385194 125599337 102625714 100780570 100255296 7465951 7493402 11437300 101263329 101244345 102591353 102592534 107786851 107783785 107769447 4345688 100276300 123158099 123165698 123151659 123411946 8080607 100833101 5724191
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