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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107959175   ATP-dependent zinc metalloprotease FTSH 7, chloroplastic 
 ghi-r.1   107950204   ATP-dependent zinc metalloprotease FTSH 7, chloroplastic 
 ghi-r.1   107906606   ATP-dependent zinc metalloprotease FTSH 7, chloroplastic 
 ghi-r.1   107886049   ATP-dependent zinc metalloprotease FTSH 7, chloroplastic 
 ath-u.5   ftsh7   FTSH protease 7 
 ath-u.5   ftsh9   FTSH protease 9 
 bra-r.6   103845312   ATP-dependent zinc metalloprotease FTSH 9, chloroplastic 
 bna-r.1   125579204   ATP-dependent zinc metalloprotease FTSH 9, chloroplastic 
 bna-r.1   106410322   ATP-dependent zinc metalloprotease FTSH 9, chloroplastic 
 bna-r.1   106371350   ATP-dependent zinc metalloprotease FTSH 7, chloroplastic 
 gma-u.5   100800195   ATP-dependent zinc metalloprotease FTSH 9, chloroplastic 
 gma-u.5   100787279   ATP-dependent zinc metalloprotease FTSH 9, chloroplastic 
 gma-u.5   100784181   ATP-dependent zinc metalloprotease FTSH 9, chloroplastic 
 vvi-u.5   100265577   ATP-dependent zinc metalloprotease FTSH 7, chloroplastic 
 ppo-u.5   7478548   ATP-dependent zinc metalloprotease FTSH 7, chloroplastic 
 ppo-u.5   7468580   ATP-dependent zinc metalloprotease FTSH 7, chloroplastic 
 mtr-u.5   11409380   ATP-dependent zinc metalloprotease FTSH 9, chloroplastic 
 sly-u.5   101263215   ATP-dependent zinc metalloprotease FTSH 9, chloroplastic 
 sot-r.1   102593764   ATP-dependent zinc metalloprotease FTSH 9, chloroplastic 
 nta-r.1   107807173   ATP-dependent zinc metalloprotease FTSH 9, chloroplastic 
 nta-r.1   107796215   ATP-dependent zinc metalloprotease FTSH 9, chloroplastic 
 osa-u.5   4330159   ATP-dependent zinc metalloprotease FTSH 7, chloroplastic-like 
 zma-u.5   100273697   ATP-dependent zinc metalloprotease FTSH 7 chloroplastic 
 zma-u.5   100502182   ATP-dependent zinc metalloprotease FTSH 7 chloroplastic 
 tae-r.2   123137770   ATP-dependent zinc metalloprotease FTSH 7, chloroplastic 
 tae-r.2   123127868   ATP-dependent zinc metalloprotease FTSH 7, chloroplastic 
 tae-r.2   123144964   ATP-dependent zinc metalloprotease FTSH 7, chloroplastic 
 hvu-r.1   123401461   ATP-dependent zinc metalloprotease FTSH 7, chloroplastic 
 sbi-r.1   8075155   ATP-dependent zinc metalloprotease FTSH 7, chloroplastic 
 bdi-r.1   100837571   ATP-dependent zinc metalloprotease FTSH 7, chloroplastic 
 cre-r.1   CHLRE_02g078966v5   uncharacterized protein 

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Top 50 coexpressed genes to 107959175 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107959175 (ghi-r.1 coexpression data)

CoexMap"107959175"


ghiLOC107959175 | Entrez gene ID : 107959175    
Species ghi ath bra bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre cit
Paralog 4 2 1 3 3 1 2 1 1 1 2 1 2 3 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006508 [list] [network] proteolysis  (1903 genes)  IEA  
GO CC
GO:0016020 [list] [network] membrane  (8195 genes)  IEA  
GO MF
GO:0004176 [list] [network] ATP-dependent peptidase activity  (96 genes)  IEA  
GO:0004222 [list] [network] metalloendopeptidase activity  (137 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (974 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (1753 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5155 genes)  IEA  
Protein XP_016750653.1 [sequence] [blastp]
XP_016750654.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 5,  chlo 3,  mito 1  (predict for XP_016750653.1)
plas 6,  chlo 2,  mito 1  (predict for XP_016750654.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_016750653.1)
chlo 5  (predict for XP_016750654.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107959175
ghi-r.1
for
107950204
ghi-r.1
for
107906606
ghi-r.1
for
107886049
ath-u.5
for
ftsh7
ath-u.5
for
ftsh9
bra-r.6
for
103845312
bna-r.1
for
125579204
bna-r.1
for
106410322
bna-r.1
for
106371350
gma-u.5
for
100800195
gma-u.5
for
100787279
gma-u.5
for
100784181
vvi-u.5
for
100265577
ppo-u.5
for
7478548
ppo-u.5
for
7468580
mtr-u.5
for
11409380
sly-u.5
for
101263215
sot-r.1
for
102593764
nta-r.1
for
107807173
nta-r.1
for
107796215
osa-u.5
for
4330159
zma-u.5
for
100273697
zma-u.5
for
100502182
tae-r.2
for
123137770
tae-r.2
for
123127868
tae-r.2
for
123144964
hvu-r.1
for
123401461
sbi-r.1
for
8075155
bdi-r.1
for
100837571
cre-r.1
for
CHLRE_02g078966v5


Ortholog ID: 6578
Species ghi ghi ghi ath ath bra bna bna bna gma gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC107959175 LOC107950204 LOC107906606 ftsh7 ftsh9 LOC103845312 LOC106410322 LOC106371350 LOC106352730 LOC100800195 LOC100787279 LOC100784181 LOC100265577 LOC7478548 LOC7468580 LOC11409380 LOC101263215 LOC102593764 LOC107807173 LOC107796215 LOC4330159 LOC100273697 LOC100502182 LOC123137770 LOC123127868 LOC123144964 LOC123401461 LOC8075155 LOC100837571 CHLRE_02g078966v5
Function* ATP-dependent zinc metalloprotease FTSH 7, chloroplastic ATP-dependent zinc metalloprotease FTSH 7, chloroplastic ATP-dependent zinc metalloprotease FTSH 7, chloroplastic FTSH protease 7 FTSH protease 9 ATP-dependent zinc metalloprotease FTSH 9, chloroplastic ATP-dependent zinc metalloprotease FTSH 9, chloroplastic ATP-dependent zinc metalloprotease FTSH 7, chloroplastic ATP-dependent zinc metalloprotease FTSH 7, chloroplastic ATP-dependent zinc metalloprotease FTSH 9, chloroplastic ATP-dependent zinc metalloprotease FTSH 9, chloroplastic ATP-dependent zinc metalloprotease FTSH 9, chloroplastic ATP-dependent zinc metalloprotease FTSH 7, chloroplastic ATP-dependent zinc metalloprotease FTSH 7, chloroplastic ATP-dependent zinc metalloprotease FTSH 7, chloroplastic ATP-dependent zinc metalloprotease FTSH 9, chloroplastic ATP-dependent zinc metalloprotease FTSH 9, chloroplastic ATP-dependent zinc metalloprotease FTSH 9, chloroplastic ATP-dependent zinc metalloprotease FTSH 9, chloroplastic ATP-dependent zinc metalloprotease FTSH 9, chloroplastic ATP-dependent zinc metalloprotease FTSH 7, chloroplastic-like ATP-dependent zinc metalloprotease FTSH 7 chloroplastic ATP-dependent zinc metalloprotease FTSH 7 chloroplastic ATP-dependent zinc metalloprotease FTSH 7, chloroplastic ATP-dependent zinc metalloprotease FTSH 7, chloroplastic ATP-dependent zinc metalloprotease FTSH 7, chloroplastic ATP-dependent zinc metalloprotease FTSH 7, chloroplastic ATP-dependent zinc metalloprotease FTSH 7, chloroplastic ATP-dependent zinc metalloprotease FTSH 7, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00900 Terpenoid backbone biosynthesis 2
ath00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00906 Carotenoid biosynthesis 4
bna04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00760 Nicotinate and nicotinamide metabolism 2
bna01240 Biosynthesis of cofactors 2
bna00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00760 Nicotinate and nicotinamide metabolism 2
bna01240 Biosynthesis of cofactors 2
bna00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00380 Tryptophan metabolism 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma01200 Carbon metabolism 2
gma04016 MAPK signaling pathway - plant 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04148 Efferocytosis 2
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04146 Peroxisome 3
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
nta04146 Peroxisome 4
nta02010 ABC transporters 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 2
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107959175 107950204 107906606 823859 836004 103845312 106410322 106371350 106352730 100800195 100787279 100784181 100265577 7478548 7468580 11409380 101263215 102593764 107807173 107796215 4330159 100273697 100502182 123137770 123127868 123144964 123401461 8075155 100837571 5727264
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