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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   ftsh9   FTSH protease 9 
 ath-r.7   ftsh9   FTSH protease 9 
 ath-m.9   ftsh9   FTSH protease 9 
 ath-e.2   ftsh9   FTSH protease 9 
 ath-m.4.bio   ftsh9   FTSH protease 9 
 ath-m.4.hor   ftsh9   FTSH protease 9 
 ath-m.4.lig   ftsh9   FTSH protease 9 
 ath-m.4.str   ftsh9   FTSH protease 9 
 ath-m.4.tis   ftsh9   FTSH protease 9 
 ath-u.5   ftsh7   FTSH protease 7 
 gma-u.5   100784181   ATP-dependent zinc metalloprotease FTSH 9, chloroplastic 
 gma-u.5   100787279   ATP-dependent zinc metalloprotease FTSH 9, chloroplastic 
 gma-u.5   100800195   ATP-dependent zinc metalloprotease FTSH 9, chloroplastic 
 vvi-u.5   100265577   ATP-dependent zinc metalloprotease FTSH 7, chloroplastic 
 ppo-u.5   7468580   ATP-dependent zinc metalloprotease FTSH 7, chloroplastic 
 ppo-u.5   7478548   ATP-dependent zinc metalloprotease FTSH 7, chloroplastic 
 mtr-u.5   11409380   ATP-dependent zinc metalloprotease FTSH 9, chloroplastic 
 sly-u.5   101263215   ATP-dependent zinc metalloprotease FTSH 9, chloroplastic 
 osa-u.5   4330159   ATP-dependent zinc metalloprotease FTSH 7, chloroplastic-like 
 zma-u.5   100273697   ATP-dependent zinc metalloprotease FTSH 7 chloroplastic 
 zma-u.5   100502182   ATP-dependent zinc metalloprotease FTSH 7 chloroplastic 

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Top 50 coexpressed genes to ftsh9 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ftsh9 (ath-u.5 coexpression data)

CoexMap"836004"


athftsh9 | Entrez gene ID : 836004      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 10 3 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA IDA ISM  
GO:0009536 [list] [network] plastid  (5443 genes)  HDA  
GO MF
GO:0004176 [list] [network] ATP-dependent peptidase activity  (19 genes)  ISS  
Protein NP_568892.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 5,  cyto_plas 3,  golg 1,  nucl 1,  extr 1,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for NP_568892.1)
Subcellular
localization
TargetP
chlo 4  (predict for NP_568892.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
ftsh9
ath-r.7
for
ftsh9
ath-m.9
for
ftsh9
ath-e.2
for
ftsh9
ath-m.4.bio
for
ftsh9
ath-m.4.hor
for
ftsh9
ath-m.4.lig
for
ftsh9
ath-m.4.str
for
ftsh9
ath-m.4.tis
for
ftsh9
ath-u.5
for
ftsh7
gma-u.5
for
100784181
gma-u.5
for
100787279
gma-u.5
for
100800195
vvi-u.5
for
100265577
ppo-u.5
for
7468580
ppo-u.5
for
7478548
mtr-u.5
for
11409380
sly-u.5
for
101263215
osa-u.5
for
4330159
zma-u.5
for
100273697
zma-u.5
for
100502182


Ortholog ID: 6578
Species ath ath bra bna bna ghi ghi gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae hvu sbi bdi cre
Symbol ftsh7 ftsh9 LOC103845312 LOC106371350 LOC106410322 LOC107906606 LOC107950204 LOC100784181 LOC100787279 LOC100265577 LOC7478548 LOC7468580 LOC11409380 LOC101263215 LOC102593764 LOC107807173 LOC107796215 LOC4330159 LOC100273697 LOC100502182 LOC123144964 LOC123127868 LOC123401461 LOC8075155 LOC100837571 CHLRE_02g078966v5
Function* FTSH protease 7 FTSH protease 9 ATP-dependent zinc metalloprotease FTSH 9, chloroplastic ATP-dependent zinc metalloprotease FTSH 7, chloroplastic ATP-dependent zinc metalloprotease FTSH 9, chloroplastic ATP-dependent zinc metalloprotease FTSH 7, chloroplastic ATP-dependent zinc metalloprotease FTSH 7, chloroplastic ATP-dependent zinc metalloprotease FTSH 9, chloroplastic ATP-dependent zinc metalloprotease FTSH 9, chloroplastic ATP-dependent zinc metalloprotease FTSH 7, chloroplastic ATP-dependent zinc metalloprotease FTSH 7, chloroplastic ATP-dependent zinc metalloprotease FTSH 7, chloroplastic ATP-dependent zinc metalloprotease FTSH 9, chloroplastic ATP-dependent zinc metalloprotease FTSH 9, chloroplastic ATP-dependent zinc metalloprotease FTSH 9, chloroplastic ATP-dependent zinc metalloprotease FTSH 9, chloroplastic ATP-dependent zinc metalloprotease FTSH 9, chloroplastic ATP-dependent zinc metalloprotease FTSH 7, chloroplastic-like ATP-dependent zinc metalloprotease FTSH 7 chloroplastic ATP-dependent zinc metalloprotease FTSH 7 chloroplastic ATP-dependent zinc metalloprotease FTSH 7, chloroplastic ATP-dependent zinc metalloprotease FTSH 7, chloroplastic ATP-dependent zinc metalloprotease FTSH 7, chloroplastic ATP-dependent zinc metalloprotease FTSH 7, chloroplastic ATP-dependent zinc metalloprotease FTSH 7, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00900 Terpenoid backbone biosynthesis 2
ath00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00760 Nicotinate and nicotinamide metabolism 2
bna01240 Biosynthesis of cofactors 2
bna00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00906 Carotenoid biosynthesis 4
bna04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04148 Efferocytosis 2
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04146 Peroxisome 3
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
nta04146 Peroxisome 4
nta02010 ABC transporters 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 2
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 823859 836004 103845312 106371350 106410322 107906606 107950204 100784181 100787279 100265577 7478548 7468580 11409380 101263215 102593764 107807173 107796215 4330159 100273697 100502182 123144964 123127868 123401461 8075155 100837571 5727264
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