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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107959404   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 ghi-r.1   107909095   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 ghi-r.1   107928353   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 ghi-r.1   107959499   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 ath-u.5   EMB2107   26S proteasome regulatory subunit, putative (RPN5) 
 ath-u.5   RPN5B   regulatory particle non-ATPase subunit 5B 
 bra-r.6   103855840   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 bra-r.6   103854115   26S proteasome non-ATPase regulatory subunit 12 homolog A-like 
 bra-r.6   103850352   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 bna-r.1   125596638   26S proteasome non-ATPase regulatory subunit 12 homolog A-like 
 bna-r.1   106430489   26S proteasome non-ATPase regulatory subunit 12 homolog A-like 
 bna-r.1   106426768   26S proteasome non-ATPase regulatory subunit 12 homolog A-like 
 cit-r.1   102612587   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 gma-u.5   100801382   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 gma-u.5   100793755   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 gma-u.5   100791893   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 vvi-u.5   100256032   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 ppo-u.5   7457153   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 ppo-u.5   7477143   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 mtr-u.5   11433744   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 mtr-u.5   11440959   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 sly-u.5   101263403   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 sly-u.5   101249344   26S proteasome non-ATPase regulatory subunit 12 homolog B-like 
 sot-r.1   102602759   26S proteasome non-ATPase regulatory subunit 12 homolog A-like 
 sot-r.1   102584724   26S proteasome non-ATPase regulatory subunit 12 homolog B-like 
 nta-r.1   107832668   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 nta-r.1   107808467   26S proteasome non-ATPase regulatory subunit 12 homolog A-like 
 nta-r.1   107803854   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 osa-u.5   4334802   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 zma-u.5   100382103   uncharacterized LOC100382103 
 zma-u.5   103627906   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 tae-r.2   123123848   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 tae-r.2   123114355   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 tae-r.2   123087573   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 hvu-r.1   123395144   26S proteasome non-ATPase regulatory subunit 12 homolog A-like 
 sbi-r.1   8055345   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 sbi-r.1   8061407   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 bdi-r.1   100827039   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 bdi-r.1   100831617   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 cre-r.1   CHLRE_14g632775v5   uncharacterized protein 

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Top 50 coexpressed genes to 107959404 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107959404 (ghi-r.1 coexpression data)

CoexMap"107959404"


ghiLOC107959404 | Entrez gene ID : 107959404    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 1 3 1 2 2 2 2 3 1 2 3 1 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03050 [list] [network] Proteasome (162 genes)
GO BP
GO CC
GO:0008541 [list] [network] proteasome regulatory particle, lid subcomplex  (32 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (13864 genes)  IEA  
GO MF
Protein XP_016750951.1 [sequence] [blastp]
XP_016750952.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_016750951.1)
cyto 6,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_016750952.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016750951.1)
other 8  (predict for XP_016750952.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107959404
ghi-r.1
for
107909095
ghi-r.1
for
107928353
ghi-r.1
for
107959499
ath-u.5
for
EMB2107
ath-u.5
for
RPN5B
bra-r.6
for
103855840
bra-r.6
for
103854115
bra-r.6
for
103850352
bna-r.1
for
125596638
bna-r.1
for
106430489
bna-r.1
for
106426768
cit-r.1
for
102612587
gma-u.5
for
100801382
gma-u.5
for
100793755
gma-u.5
for
100791893
vvi-u.5
for
100256032
ppo-u.5
for
7457153
ppo-u.5
for
7477143
mtr-u.5
for
11433744
mtr-u.5
for
11440959
sly-u.5
for
101263403
sly-u.5
for
101249344
sot-r.1
for
102602759
sot-r.1
for
102584724
nta-r.1
for
107832668
nta-r.1
for
107808467
nta-r.1
for
107803854
osa-u.5
for
4334802
zma-u.5
for
100382103
zma-u.5
for
103627906
tae-r.2
for
123123848
tae-r.2
for
123114355
tae-r.2
for
123087573
hvu-r.1
for
123395144
sbi-r.1
for
8055345
sbi-r.1
for
8061407
bdi-r.1
for
100827039
bdi-r.1
for
100831617
cre-r.1
for
CHLRE_14g632775v5


Ortholog ID: 3727
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit gma gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta nta osa zma zma tae tae tae hvu sbi sbi bdi bdi cre
Symbol LOC107959404 LOC107928353 LOC107959499 EMB2107 RPN5B LOC103854115 LOC103850352 LOC103846854 LOC106430489 LOC106384920 LOC106419340 LOC102612587 LOC100801382 LOC100791893 LOC100817016 LOC100256032 LOC7457153 LOC7477143 LOC11433744 LOC11440959 LOC101263403 LOC101249344 LOC102602759 LOC102584724 LOC107832668 LOC107808467 LOC107803854 LOC4334802 LOC100382103 LOC103627906 LOC123123848 LOC123114355 LOC123087573 LOC123395144 LOC8055345 LOC8061407 LOC100827039 LOC100831617 CHLRE_14g632775v5
Function* 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome regulatory subunit, putative (RPN5) regulatory particle non-ATPase subunit 5B 26S proteasome non-ATPase regulatory subunit 12 homolog A-like 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A-like 26S proteasome non-ATPase regulatory subunit 12 homolog A-like 26S proteasome non-ATPase regulatory subunit 12 homolog A-like 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog B-like 26S proteasome non-ATPase regulatory subunit 12 homolog A-like 26S proteasome non-ATPase regulatory subunit 12 homolog B-like 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A-like 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A uncharacterized LOC100382103 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A-like 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 5
ghi03020 RNA polymerase 2
ghi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 4
ghi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 4
ghi03020 RNA polymerase 2
ghi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 11
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 9
bra03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 11
bra03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 5
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 5
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 4
bna00510 N-Glycan biosynthesis 2
bna00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 3
cit04141 Protein processing in endoplasmic reticulum 2
cit03040 Spliceosome 2
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 9
gma00190 Oxidative phosphorylation 3
gma04145 Phagosome 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 9
gma04141 Protein processing in endoplasmic reticulum 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 4
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 8
mtr03010 Ribosome 3
mtr03018 RNA degradation 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 13
sly04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 8
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 9
sot04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 8
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 5
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 4
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 4
osa00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 7
zma03015 mRNA surveillance pathway 3
zma03420 Nucleotide excision repair 2
zma04141 Protein processing in endoplasmic reticulum 2
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae03040 Spliceosome 3
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 8
tae00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 11
hvu03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 8
sbi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 11
sbi04141 Protein processing in endoplasmic reticulum 2
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 9
bdi03015 mRNA surveillance pathway 2
bdi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 11
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 15
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107959404 107928353 107959499 830850 836597 103854115 103850352 103846854 106430489 106384920 106419340 102612587 100801382 100791893 100817016 100256032 7457153 7477143 11433744 11440959 101263403 101249344 102602759 102584724 107832668 107808467 107803854 4334802 100382103 103627906 123123848 123114355 123087573 123395144 8055345 8061407 100827039 100831617 5718337
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