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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_14g632775v5   uncharacterized protein 
 ath-u.5   EMB2107   26S proteasome regulatory subunit, putative (RPN5) 
 ath-u.5   RPN5B   regulatory particle non-ATPase subunit 5B 
 gma-u.5   100801382   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 gma-u.5   100793755   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 gma-u.5   100791893   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 sly-u.5   101263403   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 sly-u.5   101249344   26S proteasome non-ATPase regulatory subunit 12 homolog B-like 
 osa-u.5   4334802   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 zma-u.5   100382103   uncharacterized LOC100382103 
 zma-u.5   103627906   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 vvi-u.5   100256032   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 ppo-u.5   7457153   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 ppo-u.5   7477143   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 mtr-u.5   11440959   26S proteasome non-ATPase regulatory subunit 12 homolog A 
 mtr-u.5   11433744   26S proteasome non-ATPase regulatory subunit 12 homolog A 

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Top 50 coexpressed genes to CHLRE_14g632775v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_14g632775v5 (cre-r.1 coexpression data)

CoexMap"5718337"


creCHLRE_14g632775v5 | Entrez gene ID : 5718337    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 2 3 2 1 2 1 2 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03050 [list] [network] Proteasome (36 genes)
GO BP
GO CC
GO:0031595 [list] [network] nuclear proteasome complex  (1 genes)  IEA  
GO:0008541 [list] [network] proteasome regulatory particle, lid subcomplex  (9 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (2907 genes)  IEA  
GO MF
Protein XP_042917114.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 4  (predict for XP_042917114.1)
Subcellular
localization
TargetP
other 9  (predict for XP_042917114.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_14g632775v5

.
ath-u.5
for
EMB2107

.
ath-u.5
for
RPN5B

.
gma-u.5
for
100801382

.
gma-u.5
for
100793755

.
gma-u.5
for
100791893

.
sly-u.5
for
101263403

.
sly-u.5
for
101249344

.
osa-u.5
for
4334802

.
zma-u.5
for
100382103

.
zma-u.5
for
103627906

.
vvi-u.5
for
100256032

.
ppo-u.5
for
7457153

.
ppo-u.5
for
7477143

.
mtr-u.5
for
11440959

.
mtr-u.5
for
11433744

.


Ortholog ID: 3727
Species ath ath gma gma sly sly osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi bdi nta nta
Symbol EMB2107 RPN5B LOC100791893 LOC100801382 LOC101263403 LOC101249344 LOC4334802 LOC103627906 LOC100382103 LOC103854115 LOC103850352 LOC100256032 LOC7457153 LOC7477143 LOC11433744 LOC11440959 LOC123114355 LOC123123848 LOC123395144 LOC107928353 LOC107959404 LOC106384920 LOC106430489 CHLRE_14g632775v5 LOC8055345 LOC8061407 LOC102602759 LOC102584724 LOC102612587 LOC100831617 LOC100827039 LOC107832668 LOC107803854
Function* 26S proteasome regulatory subunit, putative (RPN5) regulatory particle non-ATPase subunit 5B 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog B-like 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A uncharacterized LOC100382103 26S proteasome non-ATPase regulatory subunit 12 homolog A-like 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A-like 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A-like 26S proteasome non-ATPase regulatory subunit 12 homolog A-like uncharacterized protein 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A-like 26S proteasome non-ATPase regulatory subunit 12 homolog B-like 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A 26S proteasome non-ATPase regulatory subunit 12 homolog A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 9
gma00190 Oxidative phosphorylation 3
gma04145 Phagosome 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 13
sly04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 4
osa00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 7
zma03015 mRNA surveillance pathway 3
zma03420 Nucleotide excision repair 2
zma04141 Protein processing in endoplasmic reticulum 2
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 11
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 9
bra03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 4
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 8
mtr03010 Ribosome 3
mtr03018 RNA degradation 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae03040 Spliceosome 3
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 11
hvu03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 4
ghi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 5
ghi03020 RNA polymerase 2
ghi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 5
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 5
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 8
sbi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 11
sbi04141 Protein processing in endoplasmic reticulum 2
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 8
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 9
sot04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 3
cit04141 Protein processing in endoplasmic reticulum 2
cit03040 Spliceosome 2
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 11
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 9
bdi03015 mRNA surveillance pathway 2
bdi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 8
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 4
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830850 836597 100791893 100801382 101263403 101249344 4334802 103627906 100382103 103854115 103850352 100256032 7457153 7477143 11433744 11440959 123114355 123123848 123395144 107928353 107959404 106384920 106430489 5718337 8055345 8061407 102602759 102584724 102612587 100831617 100827039 107832668 107803854
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