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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107962546   40S ribosomal protein S11 
 ghi-r.1   107901359   40S ribosomal protein S11 
 ghi-r.1   107909206   40S ribosomal protein S11 
 ghi-r.1   107916092   40S ribosomal protein S11 
 ath-u.5   EMB1080   Nucleic acid-binding, OB-fold-like protein 
 ath-u.5   AT4G30800   Nucleic acid-binding, OB-fold-like protein 
 ath-u.5   RPS11-BETA   ribosomal protein S11-beta 
 bra-r.6   103874241   40S ribosomal protein S11-3 
 bra-r.6   103874947   40S ribosomal protein S11-3 
 bra-r.6   103873107   40S ribosomal protein S11-3 
 bna-r.1   106383822   40S ribosomal protein S11-3 
 bna-r.1   111208238   40S ribosomal protein S11-3-like 
 bna-r.1   106347452   40S ribosomal protein S11-3 
 cit-r.1   102609988   40S ribosomal protein S11 
 gma-u.5   RPS11   ribosomal protein S11 
 gma-u.5   100784140   40S ribosomal protein S11 
 gma-u.5   100500186   40S ribosomal protein S11 
 vvi-u.5   100265421   small ribosomal subunit protein uS17 
 vvi-u.5   100244095   small ribosomal subunit protein uS17 
 ppo-u.5   7489484   40S ribosomal protein S11 
 ppo-u.5   7483812   40S ribosomal protein S11 
 ppo-u.5   18105113   40S ribosomal protein S11 
 mtr-u.5   11420369   40S ribosomal protein S11 
 mtr-u.5   11446689   40S ribosomal protein S11 
 mtr-u.5   11408171   40S ribosomal protein S11 
 sly-u.5   101249995   small ribosomal subunit protein uS17 
 sly-u.5   101265738   small ribosomal subunit protein uS17 
 sly-u.5   101266035   small ribosomal subunit protein uS17 
 sot-r.1   102585207   40S ribosomal protein S11-like 
 sot-r.1   102593567   40S ribosomal protein S11 
 sot-r.1   102593885   40S ribosomal protein S11 
 nta-r.1   107811223   small ribosomal subunit protein uS17 
 nta-r.1   107799813   small ribosomal subunit protein uS17 
 nta-r.1   107785006   small ribosomal subunit protein uS17 
 osa-u.5   4344935   small ribosomal subunit protein uS17 
 osa-u.5   4343620   small ribosomal subunit protein uS17 
 osa-u.5   4336976   small ribosomal subunit protein uS17 
 zma-u.5   110485086   40S ribosomal protein S11 
 zma-u.5   542552   40S ribosomal protein S11 
 zma-u.5   100280559   40S ribosomal protein S11 
 tae-r.2   123054306   40S ribosomal protein S11 
 tae-r.2   123190193   40S ribosomal protein S11 
 tae-r.2   123144808   40S ribosomal protein S11 
 hvu-r.1   123427621   40S ribosomal protein S11 
 hvu-r.1   123403960   40S ribosomal protein S11-like 
 sbi-r.1   8075895   40S ribosomal protein S11 
 sbi-r.1   8072336   40S ribosomal protein S11 
 sbi-r.1   8059678   40S ribosomal protein S11 
 bdi-r.1   100824210   40S ribosomal protein S11 
 bdi-r.1   100832014   40S ribosomal protein S11 
 bdi-r.1   100834521   40S ribosomal protein S11 
 cre-r.1   CHLRE_12g514500v5   ribosomal protein S11 

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Top 50 coexpressed genes to 107962546 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107962546 (ghi-r.1 coexpression data)

CoexMap"107962546"


ghiLOC107962546 | Entrez gene ID : 107962546    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 1 3 2 3 3 3 3 3 3 3 3 2 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (268 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
Protein XP_040970998.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  nucl 2  (predict for XP_040970998.1)
Subcellular
localization
TargetP
other 8  (predict for XP_040970998.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107962546
ghi-r.1
for
107901359
ghi-r.1
for
107909206
ghi-r.1
for
107916092
ath-u.5
for
EMB1080
ath-u.5
for
AT4G30800
ath-u.5
for
RPS11-BETA
bra-r.6
for
103874241
bra-r.6
for
103874947
bra-r.6
for
103873107
bna-r.1
for
106383822
bna-r.1
for
111208238
bna-r.1
for
106347452
cit-r.1
for
102609988
gma-u.5
for
RPS11
gma-u.5
for
100784140
gma-u.5
for
100500186
vvi-u.5
for
100265421
vvi-u.5
for
100244095
ppo-u.5
for
7489484
ppo-u.5
for
7483812
ppo-u.5
for
18105113
mtr-u.5
for
11420369
mtr-u.5
for
11446689
mtr-u.5
for
11408171
sly-u.5
for
101249995
sly-u.5
for
101265738
sly-u.5
for
101266035
sot-r.1
for
102585207
sot-r.1
for
102593567
sot-r.1
for
102593885
nta-r.1
for
107811223
nta-r.1
for
107799813
nta-r.1
for
107785006
osa-u.5
for
4344935
osa-u.5
for
4343620
osa-u.5
for
4336976
zma-u.5
for
110485086
zma-u.5
for
542552
zma-u.5
for
100280559
tae-r.2
for
123054306
tae-r.2
for
123190193
tae-r.2
for
123144808
hvu-r.1
for
123427621
hvu-r.1
for
123403960
sbi-r.1
for
8075895
sbi-r.1
for
8072336
sbi-r.1
for
8059678
bdi-r.1
for
100824210
bdi-r.1
for
100832014
bdi-r.1
for
100834521
cre-r.1
for
CHLRE_12g514500v5


Ortholog ID: 1545
Species ghi ghi ghi ath ath ath bra bra bra bna bna bna cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol LOC107909206 LOC107916092 LOC121225242 EMB1080 AT4G30800 RPS11-BETA LOC103873107 LOC103865640 LOC103854885 LOC111208238 LOC106348308 LOC106447872 LOC102609988 RPS11 LOC100784140 LOC100500094 LOC100265421 LOC100244095 LOC7489484 LOC7483812 LOC18105113 LOC11420369 LOC11446689 LOC11408171 LOC101249995 LOC101265738 LOC101266035 LOC102593567 LOC102593885 LOC102584890 LOC107799813 LOC107785006 LOC107812432 LOC4343620 LOC4336976 LOC4336975 LOC110485086 LOC542552 LOC100280559 LOC123144808 LOC123046457 LOC123427621 LOC123403960 LOC8075895 LOC8072336 LOC8059678 LOC100824210 LOC100832014 LOC100834521 CHLRE_12g514500v5
Function* 40S ribosomal protein S11 40S ribosomal protein S11 40S ribosomal protein S11 Nucleic acid-binding, OB-fold-like protein Nucleic acid-binding, OB-fold-like protein ribosomal protein S11-beta 40S ribosomal protein S11-3 40S ribosomal protein S11-3 40S ribosomal protein S11-3 40S ribosomal protein S11-3-like 40S ribosomal protein S11-3 40S ribosomal protein S11-3 40S ribosomal protein S11 ribosomal protein S11 40S ribosomal protein S11 uncharacterized LOC100500094 small ribosomal subunit protein uS17 small ribosomal subunit protein uS17 40S ribosomal protein S11 40S ribosomal protein S11 40S ribosomal protein S11 40S ribosomal protein S11 40S ribosomal protein S11 40S ribosomal protein S11 small ribosomal subunit protein uS17 small ribosomal subunit protein uS17 small ribosomal subunit protein uS17 40S ribosomal protein S11 40S ribosomal protein S11 40S ribosomal protein S11 small ribosomal subunit protein uS17 small ribosomal subunit protein uS17 small ribosomal subunit protein uS17 small ribosomal subunit protein uS17 small ribosomal subunit protein uS17 small ribosomal subunit protein uS17 40S ribosomal protein S11 40S ribosomal protein S11 40S ribosomal protein S11 40S ribosomal protein S11 40S ribosomal protein S11 40S ribosomal protein S11 40S ribosomal protein S11-like 40S ribosomal protein S11 40S ribosomal protein S11 40S ribosomal protein S11 40S ribosomal protein S11 40S ribosomal protein S11 40S ribosomal protein S11 ribosomal protein S11
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 9
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 11
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
tae03040 Spliceosome 4
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 5
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 12
bdi03013 Nucleocytoplasmic transport 2
bdi03015 mRNA surveillance pathway 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 14
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107909206 107916092 121225242 824054 829203 832439 103873107 103865640 103854885 111208238 106348308 106447872 102609988 547984 100784140 100500094 100265421 100244095 7489484 7483812 18105113 11420369 11446689 11408171 101249995 101265738 101266035 102593567 102593885 102584890 107799813 107785006 107812432 4343620 4336976 4336975 110485086 542552 100280559 123144808 123046457 123427621 123403960 8075895 8072336 8059678 100824210 100832014 100834521 5728549
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