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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107962979   titin 
 ath-u.5   AT4G11560   bromo-adjacent homology (BAH) domain-containing protein 
 gma-u.5   100796051   uncharacterized LOC100796051 
 gma-u.5   100788457   uncharacterized LOC100788457 
 gma-u.5   100787670   FK506-binding protein 5 
 vvi-u.5   100251356   uncharacterized LOC100251356 
 ppo-u.5   7465863   uncharacterized LOC7465863 
 ppo-u.5   7479314   uncharacterized LOC7479314 
 mtr-u.5   11446397   uncharacterized LOC11446397 
 mtr-u.5   11442620   uncharacterized LOC11442620 
 sly-u.5   101258175   ASI1-immunoprecipitated protein 3 
 osa-u.5   4323937   uncharacterized LOC4323937 
 zma-u.5   100285236   BAH domain containing protein 

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Top 50 coexpressed genes to 107962979 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107962979 (ghi-r.1 coexpression data)

CoexMap"107962979"


ghiLOC107962979 | Entrez gene ID : 107962979    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 3 1 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (617 genes)  IEA  
GO CC
GO MF
GO:0003682 [list] [network] chromatin binding  (366 genes)  IEA  
Protein XP_016755067.2 [sequence] [blastp]
XP_016755068.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_016755067.2)
cyto 4,  nucl 4,  cysk 1  (predict for XP_016755068.2)
Subcellular
localization
TargetP
other 7  (predict for XP_016755067.2)
scret 6,  other 5  (predict for XP_016755068.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107962979
ath-u.5
for
AT4G11560
gma-u.5
for
100796051
gma-u.5
for
100788457
gma-u.5
for
100787670
vvi-u.5
for
100251356
ppo-u.5
for
7465863
ppo-u.5
for
7479314
mtr-u.5
for
11446397
mtr-u.5
for
11442620
sly-u.5
for
101258175
osa-u.5
for
4323937
zma-u.5
for
100285236


Ortholog ID: 5339
Species ghi ghi ath bra bna bna cit cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC107924541 LOC107962979 AT4G11560 LOC103858606 LOC106402064 LOC125583652 LOC102608460 LOC102610276 LOC100776280 LOC100796051 LOC100251356 LOC7479314 LOC7465863 LOC11446397 LOC101258175 LOC102599892 LOC107767192 LOC107801785 LOC4323937 LOC100285236 LOC123078222 LOC123069857 LOC123443589 LOC8075420 LOC100843157
Function* uncharacterized LOC107924541 titin bromo-adjacent homology (BAH) domain-containing protein uncharacterized LOC103858606 uncharacterized LOC106402064 uncharacterized LOC125583652 uncharacterized LOC102608460 uncharacterized LOC102610276 uncharacterized LOC100776280 uncharacterized LOC100796051 uncharacterized LOC100251356 uncharacterized LOC7479314 uncharacterized LOC7465863 uncharacterized LOC11446397 ASI1-immunoprecipitated protein 3 uncharacterized LOC102599892 ASI1-immunoprecipitated protein 3 ASI1-immunoprecipitated protein 3 uncharacterized LOC4323937 BAH domain containing protein uncharacterized LOC123078222 uncharacterized LOC123069857 uncharacterized LOC123443589 FK506-binding protein 5 FK506-binding protein 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00220 Arginine biosynthesis 3
bra00250 Alanine, aspartate and glutamate metabolism 2
bra00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03082 ATP-dependent chromatin remodeling 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa03015 mRNA surveillance pathway 2
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 3
tae03450 Non-homologous end-joining 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 3
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107924541 107962979 826760 103858606 106402064 125583652 102608460 102610276 100776280 100796051 100251356 7479314 7465863 11446397 101258175 102599892 107767192 107801785 4323937 100285236 123078222 123069857 123443589 8075420 100843157
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