ATTED-II : GeneCoexpression result

Species	Gene	Description
mtr-u.5	11442620	uncharacterized LOC11442620
mtr-r.5	11442620	uncharacterized LOC11442620
mtr-m.5	11442620	uncharacterized LOC11442620
mtr-u.5	11437281	uncharacterized LOC11437281
mtr-u.5	11446397	uncharacterized LOC11446397
gma-u.5	100796051	uncharacterized LOC100796051
gma-u.5	100788457	uncharacterized LOC100788457
gma-u.5	100787670	FK506-binding protein 5
ppo-u.5	7479314	uncharacterized LOC7479314
ppo-u.5	7465863	uncharacterized LOC7465863
ath-u.5	AT4G11560	bromo-adjacent homology (BAH) domain-containing protein
vvi-u.5	100251356	uncharacterized LOC100251356
sly-u.5	101258175	ASI1-immunoprecipitated protein 3
osa-u.5	4323937	uncharacterized LOC4323937
zma-u.5	100285236	BAH domain containing protein

Annotation

functional annotation

KEGG

GO BP

GO:0006351 [list] [network] DNA-templated transcription

(265 genes)

IEA

GO CC

GO MF

GO:0003682 [list] [network] chromatin binding

(178 genes)

IEA

Protein

XP_003611082.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, chlo 1, plas 1

(predict for XP_003611082.1)

Subcellular
localization
TargetP

other 8

(predict for XP_003611082.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 11442620	mtr-r.5 for 11442620	mtr-m.5 for 11442620	mtr-u.5 for 11437281	mtr-u.5 for 11446397	gma-u.5 for 100796051	gma-u.5 for 100788457	gma-u.5 for 100787670	ppo-u.5 for 7479314	ppo-u.5 for 7465863	ath-u.5 for AT4G11560	vvi-u.5 for 100251356	sly-u.5 for 101258175	osa-u.5 for 4323937	zma-u.5 for 100285236

Ortholog

Ortholog ID: 5339

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC11446397

uncharacterized LOC100776280

uncharacterized LOC100796051

uncharacterized LOC7479314

uncharacterized LOC7465863

bromo-adjacent homology (BAH) domain-containing protein

uncharacterized LOC103858606

uncharacterized LOC100251356

uncharacterized LOC107924541

titin

uncharacterized LOC106402064

uncharacterized LOC125583652

uncharacterized LOC102608460

uncharacterized LOC102610276

ASI1-immunoprecipitated protein 3

uncharacterized LOC102599892

ASI1-immunoprecipitated protein 3

uncharacterized LOC4323937

BAH domain containing protein

uncharacterized LOC123078222

uncharacterized LOC123069857

uncharacterized LOC123443589

FK506-binding protein 5

FK506-binding protein 3

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00220	Arginine biosynthesis	3
bra00250	Alanine, aspartate and glutamate metabolism	2
bra00910	Nitrogen metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	3
sot03082	ATP-dependent chromatin remodeling	2
sot03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	3
osa03015	mRNA surveillance pathway	2
osa03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	3
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03440	Homologous recombination	3
tae03450	Non-homologous end-joining	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	4
hvu03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	3
bdi03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

11446397

100776280

100796051

7479314

7465863

826760

103858606

100251356

107924541

107962979

106402064

125583652

102608460

102610276

101258175

102599892

107767192

107801785

4323937

100285236

123078222

123069857

123443589

8075420

100843157

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 11442620 (mtr-u.5 coexpression data)

Top 50 enrichment test to 11442620 (mtr-u.5 coexpression data)


Species	mtr	gma	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	5	3	2	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 11442620 (mtr-u.5 coexpression data)

Top 50 enrichment test to 11442620 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**