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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   109123650   THO complex subunit 2-like 
 vvi-r.5   109123650   THO complex subunit 2-like 
 vvi-u.5   100254201   THO complex subunit 2 
 ath-u.5   THO2   THO2 
 gma-u.5   100817413   THO complex subunit 2 
 gma-u.5   100790946   THO complex subunit 2 
 bra-r.6   103835435   THO complex subunit 2 
 ppo-u.5   7455213   THO complex subunit 2 
 ppo-u.5   18104229   THO complex subunit 2 
 mtr-u.5   11410144   THO complex subunit 2 
 mtr-u.5   11435146   THO complex subunit 2 
 ghi-r.1   107886334   THO complex subunit 2 
 ghi-r.1   107909965   THO complex subunit 2 
 bna-r.1   106359234   THO complex subunit 2 
 bna-r.1   106400753   THO complex subunit 2 
 cit-r.1   102612717   THO complex subunit 2 
 sly-u.5   101261518   THO complex subunit 2 
 sot-r.1   102606042   THO complex subunit 2 
 nta-r.1   107822176   THO complex subunit 2 
 nta-r.1   107788337   THO complex subunit 2 
 osa-u.5   4324336   THO complex subunit 2 
 zma-u.5   103652539   THO complex subunit 2 
 tae-r.2   123080780   THO complex subunit 2 
 tae-r.2   123072582   THO complex subunit 2 
 tae-r.2   123063497   THO complex subunit 2 
 hvu-r.1   123445203   THO complex subunit 2-like 
 hvu-r.1   123445563   THO complex subunit 2-like 
 sbi-r.1   8078728   THO complex subunit 2 
 sbi-r.1   8084169   THO complex subunit 2 
 bdi-r.1   100846277   THO complex subunit 2 
 bdi-r.1   100843152   THO complex subunit 2 
 cre-r.1   CHLRE_12g507700v5   uncharacterized protein 

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Top 50 coexpressed genes to 109123650 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 109123650 (vvi-u.5 coexpression data)

CoexMap"109123650"


vviLOC109123650 | Entrez gene ID : 109123650    
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 2 1 2 2 2 2 1 1 1 2 1 1 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006406 [list] [network] mRNA export from nucleus  (35 genes)  IEA  
GO:0006397 [list] [network] mRNA processing  (186 genes)  IEA  
GO CC
GO:0000445 [list] [network] THO complex part of transcription export complex  (7 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (233 genes)  IEA  
Protein XP_019079579.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 3,  nucl_plas 3  (predict for XP_019079579.1)
Subcellular
localization
TargetP
other 9  (predict for XP_019079579.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
109123650
vvi-r.5
for
109123650
vvi-u.5
for
100254201
ath-u.5
for
THO2
gma-u.5
for
100817413
gma-u.5
for
100790946
bra-r.6
for
103835435
ppo-u.5
for
7455213
ppo-u.5
for
18104229
mtr-u.5
for
11410144
mtr-u.5
for
11435146
ghi-r.1
for
107886334
ghi-r.1
for
107909965
bna-r.1
for
106359234
bna-r.1
for
106400753
cit-r.1
for
102612717
sly-u.5
for
101261518
sot-r.1
for
102606042
nta-r.1
for
107822176
nta-r.1
for
107788337
osa-u.5
for
4324336
zma-u.5
for
103652539
tae-r.2
for
123080780
tae-r.2
for
123072582
tae-r.2
for
123063497
hvu-r.1
for
123445203
hvu-r.1
for
123445563
sbi-r.1
for
8078728
sbi-r.1
for
8084169
bdi-r.1
for
100846277
bdi-r.1
for
100843152
cre-r.1
for
CHLRE_12g507700v5


Ortholog ID: 6406
Species vvi vvi ath gma gma bra ppo ppo mtr mtr ghi ghi bna bna cit sly sot nta nta osa zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC109123650 LOC100254201 THO2 LOC100817413 LOC100790946 LOC103835435 LOC7455213 LOC18104229 LOC11410144 LOC11435146 LOC107886334 LOC107909965 LOC106359234 LOC106400753 LOC102612717 LOC101261518 LOC102606042 LOC107822176 LOC107788337 LOC4324336 LOC103652539 LOC123072582 LOC123063066 LOC123080266 LOC123445203 LOC123445563 LOC8078728 LOC8084169 LOC100846277 LOC100843152 CHLRE_12g507700v5
Function* THO complex subunit 2-like THO complex subunit 2 THO2 THO complex subunit 2 THO complex subunit 2 THO complex subunit 2 THO complex subunit 2 THO complex subunit 2 THO complex subunit 2 THO complex subunit 2 THO complex subunit 2 THO complex subunit 2 THO complex subunit 2 THO complex subunit 2 THO complex subunit 2 THO complex subunit 2 THO complex subunit 2 THO complex subunit 2 THO complex subunit 2 THO complex subunit 2 THO complex subunit 2 THO complex subunit 2 THO complex subunit 2 THO complex subunit 2 THO complex subunit 2-like THO complex subunit 2-like THO complex subunit 2 THO complex subunit 2 THO complex subunit 2 THO complex subunit 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 5
vvi03013 Nucleocytoplasmic transport 3
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03013 Nucleocytoplasmic transport 3
ath03015 mRNA surveillance pathway 2
ath03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03013 Nucleocytoplasmic transport 3
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03013 Nucleocytoplasmic transport 2
gma03082 ATP-dependent chromatin remodeling 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 4
bra03040 Spliceosome 4
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 4
ppo03018 RNA degradation 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 4
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 4
mtr03040 Spliceosome 4
mtr03015 mRNA surveillance pathway 2
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
mtr03040 Spliceosome 2
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 5
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 3
bna03022 Basal transcription factors 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 5
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 3
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 4
sly04120 Ubiquitin mediated proteolysis 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot04120 Ubiquitin mediated proteolysis 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 5
nta03015 mRNA surveillance pathway 2
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 4
nta03015 mRNA surveillance pathway 2
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03013 Nucleocytoplasmic transport 2
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 10
tae03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 9
tae03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 7
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 4
sbi03040 Spliceosome 2
sbi03030 DNA replication 2
sbi03410 Base excision repair 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 4
sbi03015 mRNA surveillance pathway 3
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 4
bdi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 9
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 109123650 100254201 839081 100817413 100790946 103835435 7455213 18104229 11410144 11435146 107886334 107909965 106359234 106400753 102612717 101261518 102606042 107822176 107788337 4324336 103652539 123072582 123063066 123080266 123445203 123445563 8078728 8084169 100846277 100843152 66055525
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