ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100279731	uncharacterized LOC100279731
zma-u.5	100216783	Switch/sucrose nonfermenting 3C
osa-u.5	9266524	SWI/SNF complex subunit SWI3C homolog
osa-u.5	4349954	SWI/SNF complex subunit SWI3C
ath-u.5	SWI3C	SWITCH/sucrose nonfermenting 3C
gma-u.5	732600	SWI/SNF complex subunit SWI3C
gma-u.5	100780440	SWI/SNF complex subunit SWI3C
gma-u.5	100790286	SWI/SNF complex subunit SWI3C
sly-u.5	SWI3C	SWI/SNF complex subunit SWI3C
vvi-u.5	100253973	SWI/SNF complex subunit SWI3C
ppo-u.5	18096212	SWI/SNF complex subunit SWI3C
ppo-u.5	7460970	SWI/SNF complex subunit SWI3C
mtr-u.5	11422202	SWI/SNF complex subunit SWI3C

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_020395838.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, extr 2, cyto 1, chlo 1, plas 1, cyto_pero 1, cyto_E.R. 1

(predict for XP_020395838.1)

Subcellular
localization
TargetP

other 9

(predict for XP_020395838.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100279731	zma-u.5 for 100216783	osa-u.5 for 9266524	osa-u.5 for 4349954	ath-u.5 for SWI3C	gma-u.5 for 732600	gma-u.5 for 100780440	gma-u.5 for 100790286	sly-u.5 for SWI3C	vvi-u.5 for 100253973	ppo-u.5 for 18096212	ppo-u.5 for 7460970	mtr-u.5 for 11422202

Ortholog ID: 5202

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

SWI3C

SWI3C

Function^*

uncharacterized LOC100279731

SWI/SNF complex subunit SWI3C

SWI/SNF complex subunit SWI3C homolog

SWI/SNF complex subunit SWI3C

SWITCH/sucrose nonfermenting 3C

SWI/SNF complex subunit SWI3C

SWI/SNF complex subunit SWI3C-like

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04144	Endocytosis	2
zma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	3
sbi03082	ATP-dependent chromatin remodeling	2
sbi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	2
osa03018	RNA degradation	2
osa03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2
osa03022	Basal transcription factors	2
osa03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	6
tae03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	3
tae03040	Spliceosome	3
tae03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	5
hvu03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	4
bdi03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	3
gma03040	Spliceosome	2
gma03013	Nucleocytoplasmic transport	2
gma03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03015	mRNA surveillance pathway	2
sly03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	5
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3
ppo03250	Viral life cycle - HIV-1	2
ppo04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	10
ghi03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03050	Proteasome	10
ghi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	2
nta03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	2
nta03082	ATP-dependent chromatin remodeling	2

Expression

Expression pattern

Entrez Gene ID^*

100279731

8079896

8079740

4349954

9266524

123102839

123111060

123447935

123451881

100826600

838774

100790286

100792929

101264940

103835734

103873013

100253973

18096212

7460970

11422202

107951483

107905227

106446602

106401329

102579842

102615206

107810873

107775805

66054330

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100279731 (zma-u.5 coexpression data)

Top 50 enrichment test to 100279731 (zma-u.5 coexpression data)


Species	zma	osa	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	2	2	1	3	1	1	2	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100279731 (zma-u.5 coexpression data)

Top 50 enrichment test to 100279731 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**