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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   109941689   50S ribosomal protein L29, chloroplastic 
 zma-r.6   109941689   50S ribosomal protein L29, chloroplastic 
 zma-u.5   100284301   50S ribosomal protein L29 
 zma-u.5   103628787   50S ribosomal protein L29, chloroplastic 
 zma-u.5   541790   50S ribosomal protein L29, chloroplastic 
 osa-u.5   4330763   large ribosomal subunit protein uL29c 
 ath-u.5   AT5G65220   Ribosomal L29 family protein 
 gma-u.5   100527233   putative 50S ribosomal protein L29, chloroplastic 
 gma-u.5   100305741   uncharacterized LOC100305741 
 sly-u.5   101244648   large ribosomal subunit protein uL29c-like 
 sly-u.5   101268403   large ribosomal subunit protein uL29c 
 vvi-u.5   104877824   50S ribosomal protein L29, chloroplastic 
 ppo-u.5   7490208   50S ribosomal protein L29, chloroplastic 
 mtr-u.5   25501907   50S ribosomal protein L29, chloroplastic 

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Top 50 coexpressed genes to 109941689 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 109941689 (zma-u.5 coexpression data)

CoexMap"109941689"


zmaLOC109941689 | Entrez gene ID : 109941689    
Species zma osa ath gma sly vvi ppo mtr cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 5 1 1 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006412 [list] [network] translation  (661 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (477 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (803 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (479 genes)  IEA  
Protein XP_020398481.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 3,  cysk_nucl 2,  cyto 1  (predict for XP_020398481.1)
Subcellular
localization
TargetP
other 5  (predict for XP_020398481.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
109941689

.
zma-r.6
for
109941689

.
zma-u.5
for
100284301

.
zma-u.5
for
103628787

.
zma-u.5
for
541790

.
osa-u.5
for
4330763

.
ath-u.5
for
AT5G65220

.
gma-u.5
for
100527233

.
gma-u.5
for
100305741

.
sly-u.5
for
101244648

.
sly-u.5
for
101268403

.
vvi-u.5
for
104877824

.
ppo-u.5
for
7490208

.
mtr-u.5
for
25501907

.


Ortholog ID: 5875
Species ath gma gma sly sly osa zma zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot sot cit bdi nta nta
Symbol AT5G65220 LOC100305741 LOC100527233 LOC101268403 LOC101244648 LOC4330763 LOC541790 LOC100284301 LOC103873951 LOC103855288 LOC104877824 LOC7490208 LOC25501907 LOC123138354 LOC123145595 LOC123404037 LOC107897386 LOC107913446 LOC106382881 LOC106426926 LOC8075691 LOC102591222 LOC102599673 LOC102622482 LOC100822960 LOC107805721 LOC107794717
Function* Ribosomal L29 family protein uncharacterized LOC100305741 putative 50S ribosomal protein L29, chloroplastic large ribosomal subunit protein uL29c large ribosomal subunit protein uL29c-like large ribosomal subunit protein uL29c 50S ribosomal protein L29, chloroplastic 50S ribosomal protein L29 50S ribosomal protein L29, chloroplastic 50S ribosomal protein L29, chloroplastic 50S ribosomal protein L29, chloroplastic 50S ribosomal protein L29, chloroplastic 50S ribosomal protein L29, chloroplastic 50S ribosomal protein L29, chloroplastic 50S ribosomal protein L29, chloroplastic 50S ribosomal protein L29, chloroplastic 50S ribosomal protein L29, chloroplastic 50S ribosomal protein L29, chloroplastic 50S ribosomal protein L29, chloroplastic 50S ribosomal protein L29, chloroplastic-like 50S ribosomal protein L29, chloroplastic 50S ribosomal protein L29, chloroplastic-like 50S ribosomal protein L29, chloroplastic-like 50S ribosomal protein L29, chloroplastic 50S ribosomal protein L29, chloroplastic large ribosomal subunit protein uL29c-like large ribosomal subunit protein uL29c
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 13
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
ghi00190 Oxidative phosphorylation 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
ghi00190 Oxidative phosphorylation 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836647 100305741 100527233 101268403 101244648 4330763 541790 100284301 103873951 103855288 104877824 7490208 25501907 123138354 123145595 123404037 107897386 107913446 106382881 106426926 8075691 102591222 102599673 102622482 100822960 107805721 107794717
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