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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1  100822960  50S ribosomal protein L29, chloroplastic 
 tae-r.2  123138354  50S ribosomal protein L29, chloroplastic 
 tae-r.2  123128471  50S ribosomal protein L29, chloroplastic 
 tae-r.2  123145595  50S ribosomal protein L29, chloroplastic 
 hvu-r.1  123404037  50S ribosomal protein L29, chloroplastic 
 osa-u.5  4330763  large ribosomal subunit protein uL29c 
 zma-u.5  541790  50S ribosomal protein L29, chloroplastic 
 zma-u.5  100284301  50S ribosomal protein L29 
 zma-u.5  109941689  50S ribosomal protein L29, chloroplastic 
 sbi-r.1  8075691  50S ribosomal protein L29, chloroplastic 
 ath-u.5  AT5G65220  Ribosomal L29 family protein 
 gma-u.5  100527233  putative 50S ribosomal protein L29, chloroplastic 
 gma-u.5  100305741  uncharacterized LOC100305741 
 sly-u.5  101268403  large ribosomal subunit protein uL29c 
 sly-u.5  101244648  large ribosomal subunit protein uL29c-like 
 bra-r.6  103873951  50S ribosomal protein L29, chloroplastic 
 bra-r.6  103855288  50S ribosomal protein L29, chloroplastic 
 vvi-u.5  104877824  50S ribosomal protein L29, chloroplastic 
 ppo-u.5  7490208  50S ribosomal protein L29, chloroplastic 
 mtr-u.5  25501907  50S ribosomal protein L29, chloroplastic 
 ghi-r.1  107913446  50S ribosomal protein L29, chloroplastic 
 ghi-r.1  107897386  50S ribosomal protein L29, chloroplastic 
 bna-r.1  125594346  50S ribosomal protein L29, chloroplastic-like 
 bna-r.1  125594349  50S ribosomal protein L29, chloroplastic-like 
 bna-r.1  106426926  50S ribosomal protein L29, chloroplastic-like 
 sot-r.1  102591222  50S ribosomal protein L29, chloroplastic-like 
 sot-r.1  102599673  50S ribosomal protein L29, chloroplastic-like 
 cit-r.1  102622482  50S ribosomal protein L29, chloroplastic 
 nta-r.1  107799422  large ribosomal subunit protein uL29c-like 
 nta-r.1  107794717  large ribosomal subunit protein uL29c 
 nta-r.1  107790523  large ribosomal subunit protein uL29c 

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Top 50 coexpressed genes to 100822960 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100822960 (bdi-r.1 coexpression data)

CoexMap"100822960"


bdiLOC100822960 | Entrez gene ID : 100822960
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 3 1 1 2 2 2 1 1 1 2 3 2 1 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi03010 [list] [network] Ribosome (483 genes)
GO BP
GO:0006412 [list] [network] translation  (440 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (310 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (552 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (306 genes)  IEA  
Protein XP_003570618.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_003570618.3)
Subcellular
localization
TargetP
chlo 8  (predict for XP_003570618.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

bdi-r.1
for
100822960


tae-r.2
for
123138354


tae-r.2
for
123128471


tae-r.2
for
123145595


hvu-r.1
for
123404037


osa-u.5
for
4330763


zma-u.5
for
541790


zma-u.5
for
100284301


zma-u.5
for
109941689


sbi-r.1
for
8075691


ath-u.5
for
AT5G65220


gma-u.5
for
100527233


gma-u.5
for
100305741


sly-u.5
for
101268403


sly-u.5
for
101244648


bra-r.6
for
103873951


bra-r.6
for
103855288


vvi-u.5
for
104877824


ppo-u.5
for
7490208


mtr-u.5
for
25501907


ghi-r.1
for
107913446


ghi-r.1
for
107897386


bna-r.1
for
125594346


bna-r.1
for
125594349


bna-r.1
for
106426926


sot-r.1
for
102591222


sot-r.1
for
102599673


cit-r.1
for
102622482


nta-r.1
for
107799422


nta-r.1
for
107794717


nta-r.1
for
107790523



Ortholog ID: 5875
Species bdi tae tae tae hvu osa zma zma zma sbi ath gma gma sly sly bra bra vvi ppo mtr ghi ghi bna bna bna sot sot cit nta nta nta
Symbol LOC100822960 LOC123138354 LOC123128471 LOC123145595 LOC123404037 LOC4330763 LOC541790 LOC100284301 LOC109941689 LOC8075691 AT5G65220 LOC100527233 LOC100305741 LOC101268403 LOC101244648 LOC103873951 LOC103855288 LOC104877824 LOC7490208 LOC25501907 LOC107913446 LOC107897386 LOC106426926 LOC106382881 LOC125605823 LOC102591222 LOC102599673 LOC102622482 LOC107799422 LOC107794717 LOC107805721
Function* 50S ribosomal protein L29, chloroplastic 50S ribosomal protein L29, chloroplastic 50S ribosomal protein L29, chloroplastic 50S ribosomal protein L29, chloroplastic 50S ribosomal protein L29, chloroplastic large ribosomal subunit protein uL29c 50S ribosomal protein L29, chloroplastic 50S ribosomal protein L29 50S ribosomal protein L29, chloroplastic 50S ribosomal protein L29, chloroplastic Ribosomal L29 family protein putative 50S ribosomal protein L29, chloroplastic uncharacterized LOC100305741 large ribosomal subunit protein uL29c large ribosomal subunit protein uL29c-like 50S ribosomal protein L29, chloroplastic 50S ribosomal protein L29, chloroplastic 50S ribosomal protein L29, chloroplastic 50S ribosomal protein L29, chloroplastic 50S ribosomal protein L29, chloroplastic 50S ribosomal protein L29, chloroplastic 50S ribosomal protein L29, chloroplastic 50S ribosomal protein L29, chloroplastic-like 50S ribosomal protein L29, chloroplastic 50S ribosomal protein L29, chloroplastic 50S ribosomal protein L29, chloroplastic-like 50S ribosomal protein L29, chloroplastic-like 50S ribosomal protein L29, chloroplastic large ribosomal subunit protein uL29c-like large ribosomal subunit protein uL29c large ribosomal subunit protein uL29c-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 13
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
ghi00190 Oxidative phosphorylation 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
ghi00190 Oxidative phosphorylation 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
nta00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100822960 123138354 123128471 123145595 123404037 4330763 541790 100284301 109941689 8075691 836647 100527233 100305741 101268403 101244648 103873951 103855288 104877824 7490208 25501907 107913446 107897386 106426926 106382881 125605823 102591222 102599673 102622482 107799422 107794717 107805721
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