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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   109944383   uncharacterized LOC109944383 
 zma-r.6   109944383   uncharacterized LOC109944383 
 zma-u.5   103647640   DNA mismatch repair protein MLH3 
 zma-u.5   109944384   uncharacterized LOC109944384 
 sbi-r.1   8077226   DNA mismatch repair protein MLH3 
 osa-u.5   4347791   DNA mismatch repair protein MLH3 
 tae-r.2   123122538   DNA mismatch repair protein MLH3 
 tae-r.2   123113022   DNA mismatch repair protein MLH3 
 tae-r.2   123104740   DNA mismatch repair protein MLH3 
 hvu-r.1   123451897   DNA mismatch repair protein MLH3 
 bdi-r.1   100827102   DNA mismatch repair protein MLH3 
 gma-u.5   100788019   DNA mismatch repair protein MLH3 
 gma-u.5   100780255   DNA mismatch repair protein MLH3 
 sly-u.5   101258812   DNA mismatch repair protein MLH3 
 bra-r.6   103862416   DNA mismatch repair protein MLH3 
 vvi-u.5   100253902   DNA mismatch repair protein MLH3 
 ppo-u.5   7492129   DNA mismatch repair protein MLH3 
 mtr-u.5   11424785   DNA mismatch repair protein MLH3 
 ghi-r.1   107939586   DNA mismatch repair protein MLH3 
 ghi-r.1   107937809   DNA mismatch repair protein MLH3 
 bna-r.1   106348139   DNA mismatch repair protein MLH3 
 bna-r.1   111214361   DNA mismatch repair protein MLH3 
 sot-r.1   102582017   DNA mismatch repair protein MLH3-like 
 sot-r.1   102597269   DNA mismatch repair protein MLH3 
 sot-r.1   102587970   uncharacterized LOC102587970 
 cit-r.1   102608669   DNA mismatch repair protein MLH3 
 nta-r.1   107814329   DNA mismatch repair protein MLH3 
 nta-r.1   107779080   DNA mismatch repair protein MLH3-like 
 cre-r.1   CHLRE_07g336650v5   uncharacterized protein 

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Top 50 coexpressed genes to 109944383 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 109944383 (zma-u.5 coexpression data)

CoexMap"109944383"


zmaLOC109944383 | Entrez gene ID : 109944383    
Species zma sbi osa tae hvu bdi gma sly bra vvi ppo mtr ghi bna sot cit nta cre ath
Paralog 4 1 1 3 1 1 2 1 1 1 1 1 2 2 3 1 2 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03430 [list] [network] Mismatch repair (39 genes)
GO BP
GO:0006298 [list] [network] mismatch repair  (21 genes)  IEA  
GO CC
GO:0032300 [list] [network] mismatch repair complex  (8 genes)  IEA  
GO MF
GO:0140664 [list] [network] ATP-dependent DNA damage sensor activity  (29 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (485 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2473 genes)  IEA  
Protein XP_020404715.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  plas 2,  mito 1,  extr 1,  E.R. 1,  golg 1  (predict for XP_020404715.2)
Subcellular
localization
TargetP
mito 6,  other 4  (predict for XP_020404715.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
109944383
zma-r.6
for
109944383
zma-u.5
for
103647640
zma-u.5
for
109944384
sbi-r.1
for
8077226
osa-u.5
for
4347791
tae-r.2
for
123122538
tae-r.2
for
123113022
tae-r.2
for
123104740
hvu-r.1
for
123451897
bdi-r.1
for
100827102
gma-u.5
for
100788019
gma-u.5
for
100780255
sly-u.5
for
101258812
bra-r.6
for
103862416
vvi-u.5
for
100253902
ppo-u.5
for
7492129
mtr-u.5
for
11424785
ghi-r.1
for
107939586
ghi-r.1
for
107937809
bna-r.1
for
106348139
bna-r.1
for
111214361
sot-r.1
for
102582017
sot-r.1
for
102597269
sot-r.1
for
102587970
cit-r.1
for
102608669
nta-r.1
for
107814329
nta-r.1
for
107779080
cre-r.1
for
CHLRE_07g336650v5


Ortholog ID: 7309
Species zma zma zma sbi osa tae tae tae hvu bdi gma gma sly bra vvi ppo mtr ghi ghi bna bna sot sot sot cit nta nta cre
Symbol LOC109944383 LOC103647640 LOC109944384 LOC8077226 LOC4347791 LOC123122538 LOC123113022 LOC123104740 LOC123451897 LOC100827102 LOC100788019 LOC100780255 LOC101258812 LOC103862416 LOC100253902 LOC7492129 LOC11424785 LOC107939586 LOC107937809 LOC106348139 LOC111214361 LOC102582017 LOC102587970 LOC102597195 LOC102608669 LOC107814329 LOC107779080 CHLRE_07g336650v5
Function* uncharacterized LOC109944383 DNA mismatch repair protein MLH3 uncharacterized LOC109944384 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3-like uncharacterized LOC102587970 DNA mismatch repair protein MutL-like DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3 DNA mismatch repair protein MLH3-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03430 Mismatch repair 3
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 7
tae03430 Mismatch repair 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
tae03022 Basal transcription factors 3
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
bdi03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00250 Alanine, aspartate and glutamate metabolism 2
gma00260 Glycine, serine and threonine metabolism 2
gma00270 Cysteine and methionine metabolism 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra03460 Fanconi anemia pathway 2
bra03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04148 Efferocytosis 2
ppo03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03430 Mismatch repair 2
ghi03460 Fanconi anemia pathway 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03430 Mismatch repair 2
ghi03460 Fanconi anemia pathway 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 7
bna03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 7
bna03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 4
nta03460 Fanconi anemia pathway 3
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 109944383 103647640 109944384 8077226 4347791 123122538 123113022 123104740 123451897 100827102 100788019 100780255 101258812 103862416 100253902 7492129 11424785 107939586 107937809 106348139 111214361 102582017 102587970 102597195 102608669 107814329 107779080 5725625
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