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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   110431124   probable nucleolar protein 5-2 
 zma-u.5   103649398   probable nucleolar protein 5-2 
 zma-u.5   103639139   probable nucleolar protein 5-2 
 zma-u.5   100384739   putative nucleolar protein 5-1 
 osa-u.5   4332840   probable nucleolar protein 5-2 
 osa-u.5   4332841   probable nucleolar protein 5-2 
 ath-u.5   AT3G05060   NOP56-like pre RNA processing ribonucleoprotein 
 ath-u.5   AT5G27120   NOP56-like pre RNA processing ribonucleoprotein 
 gma-u.5   100784721   probable nucleolar protein 5-2 
 gma-u.5   100775301   probable nucleolar protein 5-2 
 sly-u.5   101255995   probable nucleolar protein 5-2 
 sly-u.5   101263757   MAR-binding protein 
 vvi-u.5   100248675   probable nucleolar protein 5-2 
 ppo-u.5   7473909   probable nucleolar protein 5-2 
 ppo-u.5   18098893   probable nucleolar protein 5-1 
 mtr-u.5   11436777   probable nucleolar protein 5-2 
 mtr-u.5   11437645   probable nucleolar protein 5-1 

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Top 50 coexpressed genes to 110431124 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 110431124 (sbi-r.1 coexpression data)

CoexMap"110431124"


sbiLOC110431124 | Entrez gene ID : 110431124    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 2 2 2 2 1 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03008 [list] [network] Ribosome biogenesis in eukaryotes (91 genes)
GO BP
GO CC
GO:0031428 [list] [network] box C/D methylation guide snoRNP complex  (11 genes)  IEA  
GO:0032040 [list] [network] small-subunit processome  (50 genes)  IEA  
GO MF
GO:0030515 [list] [network] snoRNA binding  (25 genes)  IEA  
Protein XP_021305507.1 [sequence] [blastp]
XP_021305512.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  cyto_E.R. 3,  nucl 3,  chlo 1,  pero 1  (predict for XP_021305507.1)
cyto 5,  cyto_E.R. 3,  nucl 3,  chlo 1,  pero 1  (predict for XP_021305512.1)
Subcellular
localization
TargetP
other 5  (predict for XP_021305507.1)
other 5  (predict for XP_021305512.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
110431124

.
zma-u.5
for
103649398

.
zma-u.5
for
103639139

.
zma-u.5
for
100384739

.
osa-u.5
for
4332840

.
osa-u.5
for
4332841

.
ath-u.5
for
AT3G05060

.
ath-u.5
for
AT5G27120

.
gma-u.5
for
100784721

.
gma-u.5
for
100775301

.
sly-u.5
for
101255995

.
sly-u.5
for
101263757

.
vvi-u.5
for
100248675

.
ppo-u.5
for
7473909

.
ppo-u.5
for
18098893

.
mtr-u.5
for
11436777

.
mtr-u.5
for
11437645

.


Ortholog ID: 3568
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT5G27120 AT3G05060 LOC100784721 LOC100775301 LOC101255995 LOC101263757 LOC4332840 LOC4332841 LOC103639139 LOC103649398 LOC103854646 LOC103837322 LOC100248675 LOC18098893 LOC7473909 LOC11437645 LOC11436777 LOC123187584 LOC123051654 LOC123424804 LOC123448571 LOC107899143 LOC107894650 LOC106348654 LOC125606782 CHLRE_10g441400v5 LOC110431124 LOC8079815 LOC102585448 LOC102591435 LOC102607893 LOC102617154 LOC100841812 LOC100838508 LOC107813446 LOC107803219
Function* NOP56-like pre RNA processing ribonucleoprotein NOP56-like pre RNA processing ribonucleoprotein probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 MAR-binding protein probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-1 probable nucleolar protein 5-1 probable nucleolar protein 5-2 probable nucleolar protein 5-1 probable nucleolar protein 5-2 probable nucleolar protein 5-1 probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-1 probable nucleolar protein 5-1 uncharacterized protein probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 putative nucleolar protein 5-2 probable nucleolar protein 5-2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 7
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 9
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 7
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 9
bna00230 Purine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 6
bdi03020 RNA polymerase 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 8
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 8
nta03010 Ribosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832770 819668 100784721 100775301 101255995 101263757 4332840 4332841 103639139 103649398 103854646 103837322 100248675 18098893 7473909 11437645 11436777 123187584 123051654 123424804 123448571 107899143 107894650 106348654 125606782 5715998 110431124 8079815 102585448 102591435 102607893 102617154 100841812 100838508 107813446 107803219
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