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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   110431628   autophagy-related protein 3 
 sbi-r.1   8081835   autophagy-related protein 3 
 zma-u.5   100240689   uncharacterized LOC100240689 
 osa-u.5   4327346   autophagy-related protein 3 
 osa-u.5   9270245   autophagy-related protein 3 
 tae-r.2   100415831   autophagy-related protein 3 
 tae-r.2   123181691   autophagy-related protein 3 
 tae-r.2   123052490   autophagy-related protein 3 
 hvu-r.1   123439560   autophagy-related protein 3 
 bdi-r.1   100820929   autophagy-related protein 3 
 ath-u.5   ATG3   autophagy 3 (APG3) 
 gma-u.5   100814257   autophagy-related protein 3 
 gma-u.5   ATG3A   autophagy-related protein 3a 
 sly-u.5   101249556   autophagy-related protein 3 
 bra-r.6   103860600   autophagy-related protein 3 
 bra-r.6   103850662   autophagy-related protein 3 
 vvi-u.5   100264989   autophagy-related protein 3 
 ppo-u.5   112326180   autophagy-related protein 3 
 ppo-u.5   7465493   autophagy-related protein 3 
 mtr-u.5   25491869   autophagy-related protein 3 
 ghi-r.1   121204493   autophagy-related protein 3 
 ghi-r.1   107954597   autophagy-related protein 3 
 ghi-r.1   107952879   autophagy-related protein 3 
 bna-r.1   106439915   autophagy-related protein 3 
 bna-r.1   106401795   autophagy-related protein 3 
 bna-r.1   106422655   autophagy-related protein 3-like 
 sot-r.1   102587849   autophagy-related protein 3 
 cit-r.1   102615659   autophagy-related protein 3 
 nta-r.1   107780250   autophagy-related protein 3 
 nta-r.1   107777672   autophagy-related protein 3 
 nta-r.1   107772206   autophagy-related protein 3 
 cre-r.1   CHLRE_02g102350v5   uncharacterized protein 

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Top 50 coexpressed genes to 110431628 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 110431628 (sbi-r.1 coexpression data)

CoexMap"110431628"


sbiLOC110431628 | Entrez gene ID : 110431628    
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 1 2 3 1 1 1 2 1 2 1 2 1 3 3 1 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi04136 [list] [network] Autophagy - other (37 genes)
GO BP
GO:0044804 [list] [network] nucleophagy  (16 genes)  IEA  
GO:0000422 [list] [network] autophagy of mitochondrion  (20 genes)  IEA  
GO:0000045 [list] [network] autophagosome assembly  (29 genes)  IEA  
GO CC
GO:0000153 [list] [network] cytoplasmic ubiquitin ligase complex  (7 genes)  IEA  
GO:0005829 [list] [network] cytosol  (856 genes)  IEA  
GO MF
GO:0019776 [list] [network] Atg8-family ligase activity  (2 genes)  IEA  
Protein XP_021306485.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_021306485.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for XP_021306485.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
110431628
sbi-r.1
for
8081835
zma-u.5
for
100240689
osa-u.5
for
4327346
osa-u.5
for
9270245
tae-r.2
for
100415831
tae-r.2
for
123181691
tae-r.2
for
123052490
hvu-r.1
for
123439560
bdi-r.1
for
100820929
ath-u.5
for
ATG3
gma-u.5
for
100814257
gma-u.5
for
ATG3A
sly-u.5
for
101249556
bra-r.6
for
103860600
bra-r.6
for
103850662
vvi-u.5
for
100264989
ppo-u.5
for
112326180
ppo-u.5
for
7465493
mtr-u.5
for
25491869
ghi-r.1
for
121204493
ghi-r.1
for
107954597
ghi-r.1
for
107952879
bna-r.1
for
106439915
bna-r.1
for
106401795
bna-r.1
for
106422655
sot-r.1
for
102587849
cit-r.1
for
102615659
nta-r.1
for
107780250
nta-r.1
for
107777672
nta-r.1
for
107772206
cre-r.1
for
CHLRE_02g102350v5


Ortholog ID: 6109
Species sbi sbi zma osa osa tae tae tae hvu bdi ath gma gma sly bra bra vvi ppo ppo mtr ghi ghi ghi bna bna bna sot cit nta nta nta cre
Symbol LOC110431628 LOC8081835 LOC100240689 LOC4327346 LOC9270245 LOC100415831 LOC123181691 LOC123052490 LOC123439560 LOC100820929 ATG3 LOC100814257 ATG3A LOC101249556 LOC103860600 LOC103850662 LOC100264989 LOC112326180 LOC7465493 LOC25491869 LOC121204493 LOC107954597 LOC107900819 LOC106401795 LOC106422655 LOC106422788 LOC102587849 LOC102615659 LOC107777672 LOC107772206 LOC107794515 CHLRE_02g102350v5
Function* autophagy-related protein 3 autophagy-related protein 3 uncharacterized LOC100240689 autophagy-related protein 3 autophagy-related protein 3 autophagy-related protein 3 autophagy-related protein 3 autophagy-related protein 3 autophagy-related protein 3 autophagy-related protein 3 autophagy 3 (APG3) autophagy-related protein 3 autophagy-related protein 3a autophagy-related protein 3 autophagy-related protein 3 autophagy-related protein 3 autophagy-related protein 3 autophagy-related protein 3 autophagy-related protein 3 autophagy-related protein 3 autophagy-related protein 3 autophagy-related protein 3 autophagy-related protein 3 autophagy-related protein 3 autophagy-related protein 3-like autophagy-related protein 3-like autophagy-related protein 3 autophagy-related protein 3 autophagy-related protein 3 autophagy-related protein 3 autophagy-related protein 3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 4
sbi04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00280 Valine, leucine and isoleucine degradation 2
sbi00410 beta-Alanine metabolism 2
sbi00640 Propanoate metabolism 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 7
zma04144 Endocytosis 3
zma04145 Phagosome 2
zma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 5
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 4
tae03250 Viral life cycle - HIV-1 4
tae03272 Virion - Hepatitis viruses 4
tae04144 Endocytosis 4
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 7
tae03250 Viral life cycle - HIV-1 4
tae03272 Virion - Hepatitis viruses 4
tae03050 Proteasome 3
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 10
tae04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
hvu03013 Nucleocytoplasmic transport 2
hvu04142 Lysosome 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 3
ath04144 Endocytosis 2
ath04145 Phagosome 2
ath04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 2
gma00592 alpha-Linolenic acid metabolism 2
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 4
vvi04144 Endocytosis 4
vvi03250 Viral life cycle - HIV-1 3
vvi03272 Virion - Hepatitis viruses 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
cit03060 Protein export 2
cit04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 4
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 3
nta04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04136 Autophagy - other 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 110431628 8081835 100240689 4327346 9270245 100415831 123181691 123052490 123439560 100820929 836271 100814257 100787410 101249556 103860600 103850662 100264989 112326180 7465493 25491869 121204493 107954597 107900819 106401795 106422655 106422788 102587849 102615659 107777672 107772206 107794515 5725346
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