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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   110433043   nuclear pore complex protein NUP58-like 
 zma-u.5   103645634   nuclear pore complex protein NUP58 
 zma-u.5   100194061   nucleoporin p58/p45 
 zma-u.5   100282882   nucleoporin p58/p45 
 osa-u.5   4347240   nuclear pore complex protein NUP58 
 osa-u.5   9267365   nuclear pore complex protein NUP58 
 tae-r.2   123122941   nuclear pore complex protein NUP58 
 tae-r.2   123103945   nuclear pore complex protein NUP58 
 tae-r.2   123105135   nuclear pore complex protein NUP58 
 hvu-r.1   123398565   nuclear pore complex protein NUP58-like 
 hvu-r.1   123397168   nuclear pore complex protein NUP58-like 
 bdi-r.1   100841579   nuclear pore complex protein NUP58 
 ath-u.5   AT4G37130   hydroxyproline-rich glycoprotein family protein 
 gma-u.5   100776992   nuclear pore complex protein NUP58 
 gma-u.5   100805204   nuclear pore complex protein NUP58 
 sly-u.5   101255050   nuclear pore complex protein NUP58 
 bra-r.6   103835013   nuclear pore complex protein NUP58 
 bra-r.6   103864202   nuclear pore complex protein NUP58 
 vvi-u.5   100855059   nuclear pore complex protein NUP58 
 ppo-u.5   7477983   nuclear pore complex protein NUP58 
 mtr-u.5   11413486   nuclear pore complex protein NUP58 
 ghi-r.1   107945314   nuclear pore complex protein NUP58 
 ghi-r.1   107933073   nuclear pore complex protein NUP58 
 bna-r.1   106437580   nuclear pore complex protein NUP58 
 sot-r.1   102598416   nuclear pore complex protein NUP58 
 cit-r.1   102614875   nuclear pore complex protein NUP58 
 nta-r.1   107765235   nuclear pore complex protein NUP58 
 nta-r.1   107814601   nuclear pore complex protein NUP58 
 cre-r.1   CHLRE_16g685217v5   uncharacterized protein 

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Top 50 coexpressed genes to 110433043 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 110433043 (sbi-r.1 coexpression data)

CoexMap"110433043"


sbiLOC110433043 | Entrez gene ID : 110433043    
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 2 3 2 1 1 2 1 2 1 1 1 2 1 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03013 [list] [network] Nucleocytoplasmic transport (112 genes)
GO BP
GO:0006913 [list] [network] nucleocytoplasmic transport  (105 genes)  IEA  
GO CC
GO:0005643 [list] [network] nuclear pore  (42 genes)  IEA  
GO MF
GO:0008139 [list] [network] nuclear localization sequence binding  (14 genes)  IEA  
GO:0017056 [list] [network] structural constituent of nuclear pore  (21 genes)  IEA  
Protein XP_021310303.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  nucl_plas 4,  chlo 1  (predict for XP_021310303.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_021310303.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
110433043
zma-u.5
for
103645634
zma-u.5
for
100194061
zma-u.5
for
100282882
osa-u.5
for
4347240
osa-u.5
for
9267365
tae-r.2
for
123122941
tae-r.2
for
123103945
tae-r.2
for
123105135
hvu-r.1
for
123398565
hvu-r.1
for
123397168
bdi-r.1
for
100841579
ath-u.5
for
AT4G37130
gma-u.5
for
100776992
gma-u.5
for
100805204
sly-u.5
for
101255050
bra-r.6
for
103835013
bra-r.6
for
103864202
vvi-u.5
for
100855059
ppo-u.5
for
7477983
mtr-u.5
for
11413486
ghi-r.1
for
107945314
ghi-r.1
for
107933073
bna-r.1
for
106437580
sot-r.1
for
102598416
cit-r.1
for
102614875
nta-r.1
for
107765235
nta-r.1
for
107814601
cre-r.1
for
CHLRE_16g685217v5


Ortholog ID: 5565
Species sbi zma zma zma osa osa tae tae tae hvu hvu bdi ath gma gma sly bra bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC110433043 LOC103645634 LOC100194061 LOC100282882 LOC4347240 LOC9267365 LOC123103945 LOC123105135 LOC123121714 LOC123398565 LOC123397168 LOC100841579 AT4G37130 LOC100776992 LOC100805204 LOC101255050 LOC103835013 LOC103864202 LOC100855059 LOC7477983 LOC11413486 LOC107945314 LOC107933073 LOC106437580 LOC125608164 LOC102598416 LOC102614875 LOC107765235 LOC107814601 CHLRE_16g685217v5
Function* nuclear pore complex protein NUP58-like nuclear pore complex protein NUP58 nucleoporin p58/p45 nucleoporin p58/p45 nuclear pore complex protein NUP58 nuclear pore complex protein NUP58 nuclear pore complex protein NUP58 nuclear pore complex protein NUP58 nuclear pore complex protein NUP58 nuclear pore complex protein NUP58-like nuclear pore complex protein NUP58-like nuclear pore complex protein NUP58 hydroxyproline-rich glycoprotein family protein nuclear pore complex protein NUP58 nuclear pore complex protein NUP58 nuclear pore complex protein NUP58 nuclear pore complex protein NUP58 nuclear pore complex protein NUP58 nuclear pore complex protein NUP58 nuclear pore complex protein NUP58 nuclear pore complex protein NUP58 nuclear pore complex protein NUP58 nuclear pore complex protein NUP58 nuclear pore complex protein NUP58 nuclear pore complex protein NUP58-like nuclear pore complex protein NUP58 nuclear pore complex protein NUP58 nuclear pore complex protein NUP58 nuclear pore complex protein NUP58 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 7
zma03013 Nucleocytoplasmic transport 4
zma03015 mRNA surveillance pathway 2
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 4
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00561 Glycerolipid metabolism 3
tae00566 Sulfoquinovose metabolism 3
tae00240 Pyrimidine metabolism 2
tae01232 Nucleotide metabolism 2
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 6
hvu03013 Nucleocytoplasmic transport 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 7
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 5
gma03040 Spliceosome 4
gma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 5
sly03040 Spliceosome 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 6
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 2
ppo03410 Base excision repair 2
ppo03420 Nucleotide excision repair 2
ppo03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03008 Ribosome biogenesis in eukaryotes 4
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03008 Ribosome biogenesis in eukaryotes 4
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 15
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 110433043 103645634 100194061 100282882 4347240 9267365 123103945 123105135 123121714 123398565 123397168 100841579 829867 100776992 100805204 101255050 103835013 103864202 100855059 7477983 11413486 107945314 107933073 106437580 125608164 102598416 102614875 107765235 107814601 5724753
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