Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   110434867   RNA-binding protein 38-like 
 zma-u.5   100279918   putative RNA-binding protein ARP1 
 zma-u.5   100280521   RNA-binding region-containing protein 1 
 zma-u.5   100381763   uncharacterized LOC100381763 
 osa-u.5   4340517   probable RNA-binding protein ARP1 
 osa-u.5   4330772   probable RNA-binding protein ARP1 
 ath-u.5   AT1G22330   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-u.5   AT1G78260   RNA-binding (RRM/RBD/RNP motifs) family protein 
 gma-u.5   100811977   RNA recognition domain-containing protein 
 gma-u.5   100794651   RNA-binding protein 38 
 gma-u.5   100787086   RNA-binding protein 38 
 sly-u.5   101258063   uncharacterized LOC101258063 
 vvi-u.5   100253997   uncharacterized LOC100253997 
 ppo-u.5   7461784   uncharacterized LOC7461784 
 mtr-u.5   11430239   RNA-binding protein 38 

close


Top 50 coexpressed genes to 110434867 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 110434867 (sbi-r.1 coexpression data)

CoexMap"110434867"


sbiLOC110434867 | Entrez gene ID : 110434867    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 2 2 3 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
Protein XP_021315319.1 [sequence] [blastp]
XP_021315320.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_021315319.1)
nucl 10  (predict for XP_021315320.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_021315319.1)
chlo 7  (predict for XP_021315320.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
110434867

.
zma-u.5
for
100279918

.
zma-u.5
for
100280521

.
zma-u.5
for
100381763

.
osa-u.5
for
4340517

.
osa-u.5
for
4330772

.
ath-u.5
for
AT1G22330

.
ath-u.5
for
AT1G78260

.
gma-u.5
for
100811977

.
gma-u.5
for
100794651

.
gma-u.5
for
100787086

.
sly-u.5
for
101258063

.
vvi-u.5
for
100253997

.
ppo-u.5
for
7461784

.
mtr-u.5
for
11430239

.


Ortholog ID: 3518
Species ath ath gma gma sly osa osa zma zma bra bra vvi ppo mtr tae tae hvu hvu ghi ghi bna bna sbi sot cit bdi bdi nta nta
Symbol AT1G78260 AT1G22330 LOC100794651 LOC100788516 LOC101258063 LOC4330772 LOC4340517 LOC100381763 LOC100279918 LOC103830531 LOC103829336 LOC100253997 LOC7461784 LOC11430239 LOC123152643 LOC123169800 LOC123412021 LOC123403375 LOC107957765 LOC107901464 LOC106354706 LOC106353442 LOC110434867 LOC102591750 LOC102619869 LOC100846923 LOC100841108 LOC107775859 LOC107810518
Function* RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding protein 38 RNA-binding protein 38 uncharacterized LOC101258063 probable RNA-binding protein ARP1 probable RNA-binding protein ARP1 uncharacterized LOC100381763 putative RNA-binding protein ARP1 RNA-binding protein 24 probable RNA-binding protein ARP1 uncharacterized LOC100253997 uncharacterized LOC7461784 RNA-binding protein 38 RNA-binding protein 38 probable RNA-binding protein ARP1 RNA-binding protein 24-like probable RNA-binding protein ARP1 RNA-binding protein 38 RNA-binding protein 38 RNA-binding protein 24 RNA-binding protein 24 RNA-binding protein 38-like RNA-binding protein 24-like uncharacterized LOC102619869 probable RNA-binding protein ARP1 RNA-binding protein 24 uncharacterized LOC107775859 uncharacterized LOC107810518
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00061 Fatty acid biosynthesis 2
tae01040 Biosynthesis of unsaturated fatty acids 2
tae01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 4
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00460 Cyanoamino acid metabolism 2
cit00500 Starch and sucrose metabolism 2
cit00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844161 838839 100794651 100788516 101258063 4330772 4340517 100381763 100279918 103830531 103829336 100253997 7461784 11430239 123152643 123169800 123412021 123403375 107957765 107901464 106354706 106353442 110434867 102591750 102619869 100846923 100841108 107775859 107810518
The preparation time of this page was 0.2 [sec].