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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   111200801   RNA-binding protein BRN1-like 
 bna-r.1   106380585   RNA-binding protein BRN1 
 bna-r.1   106392290   RNA-binding protein BRN1 
 bna-r.1   106397716   RNA-binding protein BRN2 
 bra-r.6   103868177   RNA-binding protein BRN1 
 bra-r.6   103846895   RNA-binding protein BRN1 
 bra-r.6   103844504   RNA-binding protein BRN2 
 ath-u.5   RBP-DR1   RNA-binding protein-defense related 1 
 ath-u.5   AT1G03457   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ghi-r.1   107936848   RNA-binding protein BRN1 
 ghi-r.1   107930136   RNA-binding protein BRN1 
 ghi-r.1   107912394   RNA-binding protein BRN1 
 cit-r.1   102623068   RNA-binding protein BRN1 
 gma-u.5   100796156   RNA-binding protein BRN1 
 gma-u.5   100776362   RNA-binding protein BRN1 
 gma-u.5   100813239   RNA-binding protein BRN1 
 vvi-u.5   100257891   RNA-binding protein BRN1 
 ppo-u.5   7458240   RNA-binding protein BRN1 
 ppo-u.5   7466259   RNA-binding protein BRN1 
 mtr-u.5   25499577   RNA-binding protein BRN1 
 sly-u.5   101263462   RNA-binding protein BRN1 
 sot-r.1   102593664   RNA-binding protein BRN1 
 sot-r.1   102604979   RNA-binding protein BRN1-like 
 nta-r.1   107761631   RNA-binding protein BRN1 
 nta-r.1   107812984   RNA-binding protein BRN1-like 
 nta-r.1   107812555   RNA-binding protein BRN1 
 osa-u.5   4326538   RNA-binding protein BRN1 
 osa-u.5   4338600   RNA-binding protein BRN1 
 osa-u.5   4344194   RNA-binding protein BRN1 
 zma-u.5   100286166   uncharacterized LOC100286166 
 zma-u.5   100274164   uncharacterized LOC100274164 
 zma-u.5   103635500   RNA-binding protein BRN1 
 tae-r.2   123053731   RNA-binding protein BRN1 
 tae-r.2   123072344   RNA-binding protein BRN1 
 tae-r.2   123080591   RNA-binding protein BRN1 
 hvu-r.1   123445415   RNA-binding protein BRN1-like 
 hvu-r.1   123440285   RNA-binding protein BRN1-like 
 sbi-r.1   110434187   RNA-binding protein BRN1-like 
 sbi-r.1   8055824   RNA-binding protein BRN1 
 bdi-r.1   100846087   RNA-binding protein BRN1 
 bdi-r.1   100822623   RNA-binding protein BRN1 
 cre-r.1   CHLRE_03g177200v5   uncharacterized protein 

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Top 50 coexpressed genes to 111200801 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 111200801 (bna-r.1 coexpression data)

CoexMap"111200801"


bnaLOC111200801 | Entrez gene ID : 111200801    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 2 3 1 3 1 2 1 1 2 3 3 3 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:1990904 [list] [network] ribonucleoprotein complex  (2131 genes)  IEA  
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (16489 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (918 genes)  IEA  
Protein XP_022547892.2 [sequence] [blastp]
XP_048595205.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 1,  mito 1,  vacu 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_022547892.2)
nucl 7,  cyto 1,  mito 1,  vacu 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_048595205.1)
Subcellular
localization
TargetP
other 8  (predict for XP_022547892.2)
other 8  (predict for XP_048595205.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
111200801
bna-r.1
for
106380585
bna-r.1
for
106392290
bna-r.1
for
106397716
bra-r.6
for
103868177
bra-r.6
for
103846895
bra-r.6
for
103844504
ath-u.5
for
RBP-DR1
ath-u.5
for
AT1G03457
ghi-r.1
for
107936848
ghi-r.1
for
107930136
ghi-r.1
for
107912394
cit-r.1
for
102623068
gma-u.5
for
100796156
gma-u.5
for
100776362
gma-u.5
for
100813239
vvi-u.5
for
100257891
ppo-u.5
for
7458240
ppo-u.5
for
7466259
mtr-u.5
for
25499577
sly-u.5
for
101263462
sot-r.1
for
102593664
sot-r.1
for
102604979
nta-r.1
for
107761631
nta-r.1
for
107812984
nta-r.1
for
107812555
osa-u.5
for
4326538
osa-u.5
for
4338600
osa-u.5
for
4344194
zma-u.5
for
100286166
zma-u.5
for
100274164
zma-u.5
for
103635500
tae-r.2
for
123053731
tae-r.2
for
123072344
tae-r.2
for
123080591
hvu-r.1
for
123445415
hvu-r.1
for
123440285
sbi-r.1
for
110434187
sbi-r.1
for
8055824
bdi-r.1
for
100846087
bdi-r.1
for
100822623
cre-r.1
for
CHLRE_03g177200v5


Ortholog ID: 3362
Species bna bna bna bra bra bra ath ath ghi ghi ghi cit gma gma gma vvi ppo ppo mtr sly sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC111200801 LOC106380585 LOC106397716 LOC103868177 LOC103846895 LOC103844504 RBP-DR1 AT1G03457 LOC107936848 LOC107930136 LOC107912394 LOC102623068 LOC100776362 LOC100813239 LOC100807662 LOC100257891 LOC7458240 LOC7466259 LOC25499577 LOC101263462 LOC102593664 LOC102604979 LOC107761631 LOC107812984 LOC107812555 LOC4326538 LOC4338600 LOC4344194 LOC100286166 LOC100274164 LOC103635500 LOC123072344 LOC123130186 LOC123063372 LOC123445415 LOC123440285 LOC110434187 LOC8055824 LOC100846087 LOC100822623 CHLRE_03g177200v5
Function* RNA-binding protein BRN1-like RNA-binding protein BRN1 RNA-binding protein BRN2 RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN2 RNA-binding protein-defense related 1 RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN1-like RNA-binding protein BRN1 RNA-binding protein BRN1-like RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN1 uncharacterized LOC100286166 uncharacterized LOC100274164 RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN1-like RNA-binding protein BRN1-like RNA-binding protein BRN1-like RNA-binding protein BRN1 RNA-binding protein BRN1 RNA-binding protein BRN1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 3
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04517 IgSF CAM signaling 3
ath05100 Bacterial invasion of epithelial cells 3
ath04145 Phagosome 2
ath04148 Efferocytosis 2
ath04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04145 Phagosome 2
ath04148 Efferocytosis 2
ath04517 IgSF CAM signaling 2
ath04518 Integrin signaling 2
ath04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit00350 Tyrosine metabolism 3
cit00360 Phenylalanine metabolism 3
cit00380 Tryptophan metabolism 3
cit00901 Indole alkaloid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04145 Phagosome 2
gma04148 Efferocytosis 2
gma04517 IgSF CAM signaling 2
gma04518 Integrin signaling 2
gma04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04145 Phagosome 2
gma04148 Efferocytosis 2
gma04517 IgSF CAM signaling 2
gma04518 Integrin signaling 2
gma04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 2
vvi00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04145 Phagosome 7
mtr04517 IgSF CAM signaling 7
mtr04814 Motor proteins 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00051 Fructose and mannose metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 2
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04145 Phagosome 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 4
nta01232 Nucleotide metabolism 4
nta01240 Biosynthesis of cofactors 4
nta00290 Valine, leucine and isoleucine biosynthesis 2
nta00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 7
nta04130 SNARE interactions in vesicular transport 2
nta03060 Protein export 2
nta04145 Phagosome 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00100 Steroid biosynthesis 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04145 Phagosome 7
zma04517 IgSF CAM signaling 7
zma04814 Motor proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00600 Sphingolipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00511 Other glycan degradation 2
tae00513 Various types of N-glycan biosynthesis 2
tae00520 Amino sugar and nucleotide sugar metabolism 2
tae00531 Glycosaminoglycan degradation 2
tae00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae02010 ABC transporters 3
tae00511 Other glycan degradation 3
tae00513 Various types of N-glycan biosynthesis 3
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae00531 Glycosaminoglycan degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 4
sbi01230 Biosynthesis of amino acids 4
sbi01212 Fatty acid metabolism 3
sbi04146 Peroxisome 3
sbi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 2
bdi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 111200801 106380585 106397716 103868177 103846895 103844504 828090 839497 107936848 107930136 107912394 102623068 100776362 100813239 100807662 100257891 7458240 7466259 25499577 101263462 102593664 102604979 107761631 107812984 107812555 4326538 4338600 4344194 100286166 100274164 103635500 123072344 123130186 123063372 123445415 123440285 110434187 8055824 100846087 100822623 5728836
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