ATTED-II : GeneCoexpression result

Species	Gene	Description
bna-r.1	111206317	DNA-binding protein DDB_G0278111-like
bna-r.1	125605094	DNA-binding protein DDB_G0278111-like
bna-r.1	125594893	DNA-binding protein DDB_G0278111-like
bna-r.1	106421709	DNA-binding protein DDB_G0278111-like
bra-r.6	103835253	seipin-2
bra-r.6	103840456	DNA-binding protein DDB_G0278111
ath-u.5	AT1G29850	double-stranded DNA-binding family protein
ghi-r.1	107935878	DNA-binding protein DDB_G0278111
ghi-r.1	107913141	DNA-binding protein DDB_G0278111
cit-r.1	102628872	uncharacterized LOC102628872
gma-u.5	100786356	DNA-binding protein DDB_G0278111
gma-u.5	100305716	uncharacterized LOC100305716
vvi-u.5	100245316	uncharacterized LOC100245316
ppo-u.5	18095295	uncharacterized LOC18095295
mtr-u.5	25493385	DNA-binding protein DDB_G0278111
sly-u.5	101265990	DNA-binding protein
sot-r.1	102592706	DNA-binding protein DDB_G0278111
nta-r.1	107768029	uncharacterized LOC107768029
nta-r.1	107797368	uncharacterized LOC107797368
nta-r.1	107805947	uncharacterized LOC107805947
osa-u.5	9269971	uncharacterized LOC9269971
zma-u.5	103635288	programmed cell death protein 5
zma-u.5	100280625	uncharacterized LOC100280625
tae-r.2	123065791	DNA-binding protein DDB_G0278111
tae-r.2	123143360	DNA-binding protein DDB_G0278111
tae-r.2	123182873	DNA-binding protein DDB_G0278111
hvu-r.1	123447841	uncharacterized LOC123447841
sbi-r.1	8069004	DNA-binding protein DDB_G0278111
bdi-r.1	100842744	DNA-binding protein DDB_G0278111
cre-r.1	CHLRE_12g557800v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005829 [list] [network] cytosol	(3196 genes)	IEA
GO:0005634 [list] [network] nucleus	(9971 genes)	IEA

GO MF

GO:0003677 [list] [network] DNA binding

(6522 genes)

IEA

Protein

XP_022558613.1 [sequence] [blastp]
XP_022558614.1 [sequence] [blastp]
XP_048614908.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, mito 4, cyto 2, chlo_mito 2	(predict for XP_022558613.1)
nucl 4, mito 4, cyto 2, chlo_mito 2	(predict for XP_022558614.1)
nucl 4, mito 4, cyto 2, chlo_mito 2	(predict for XP_048614908.1)

Subcellular
localization
TargetP

other 7	(predict for XP_022558613.1)
other 7	(predict for XP_022558614.1)
other 7	(predict for XP_048614908.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 111206317	bna-r.1 for 125605094	bna-r.1 for 125594893	bna-r.1 for 106421709	bra-r.6 for 103835253	bra-r.6 for 103840456	ath-u.5 for AT1G29850	ghi-r.1 for 107935878	ghi-r.1 for 107913141	cit-r.1 for 102628872	gma-u.5 for 100786356	gma-u.5 for 100305716	vvi-u.5 for 100245316	ppo-u.5 for 18095295	mtr-u.5 for 25493385	sly-u.5 for 101265990	sot-r.1 for 102592706	nta-r.1 for 107768029	nta-r.1 for 107797368	nta-r.1 for 107805947	osa-u.5 for 9269971	zma-u.5 for 103635288	zma-u.5 for 100280625	tae-r.2 for 123065791	tae-r.2 for 123143360	tae-r.2 for 123182873	hvu-r.1 for 123447841	sbi-r.1 for 8069004	bdi-r.1 for 100842744	cre-r.1 for CHLRE_12g557800v5

Ortholog

Ortholog ID: 5420

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

DNA-binding protein DDB_G0278111-like

DNA-binding protein DDB_G0278111

DNA-binding protein DDB_G0278111-like

seipin-2

DNA-binding protein DDB_G0278111

double-stranded DNA-binding family protein

DNA-binding protein DDB_G0278111

uncharacterized LOC102628872

DNA-binding protein DDB_G0278111

uncharacterized LOC100305716

uncharacterized LOC100245316

uncharacterized LOC18095295

DNA-binding protein DDB_G0278111

DNA-binding protein

DNA-binding protein DDB_G0278111

uncharacterized LOC107768029

uncharacterized LOC107797368

uncharacterized LOC107829137

uncharacterized LOC9269971

programmed cell death protein 5

uncharacterized LOC100280625

DNA-binding protein DDB_G0278111

uncharacterized LOC123447841

DNA-binding protein DDB_G0278111

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00270	Cysteine and methionine metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	4
bna00270	Cysteine and methionine metabolism	2
bna04144	Endocytosis	2
bna04145	Phagosome	2
bna04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2
bra00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	4
ath04144	Endocytosis	3
ath04626	Plant-pathogen interaction	2
ath03020	RNA polymerase	2
ath03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	10
ghi03083	Polycomb repressive complex	8
ghi04141	Protein processing in endoplasmic reticulum	8
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	10
ghi03083	Polycomb repressive complex	8
ghi04141	Protein processing in endoplasmic reticulum	8
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03420	Nucleotide excision repair	2
gma04120	Ubiquitin mediated proteolysis	2
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04145	Phagosome	5
ppo04144	Endocytosis	4
ppo04148	Efferocytosis	4
ppo03050	Proteasome	3
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	6
mtr04120	Ubiquitin mediated proteolysis	2
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	4
sly03020	RNA polymerase	2
sly03420	Nucleotide excision repair	2
sly03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04148	Efferocytosis	2
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03022	Basal transcription factors	2
nta04144	Endocytosis	2
nta00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	16
nta00230	Purine metabolism	2
nta00240	Pyrimidine metabolism	2
nta01232	Nucleotide metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	7
zma03013	Nucleocytoplasmic transport	2
zma03083	Polycomb repressive complex	2
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	4
tae04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03020	RNA polymerase	2
hvu03420	Nucleotide excision repair	2
hvu04144	Endocytosis	2
hvu04145	Phagosome	2
hvu04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	2
sbi03013	Nucleocytoplasmic transport	2
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03060	Protein export	3
bdi03050	Proteasome	2
bdi00270	Cysteine and methionine metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

125594893

106364685

106361607

103835253

103840456

839863

107935878

107913141

102628872

100786356

100305716

100245316

18095295

25493385

101265990

102592706

107768029

107797368

107829137

9269971

103635288

100280625

123065791

123143360

123182873

123447841

8069004

100842744

5728375

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 111206317 (bna-r.1 coexpression data)

Top 50 enrichment test to 111206317 (bna-r.1 coexpression data)


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	1	2	1	2	1	1	1	1	1	3	1	2	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 111206317 (bna-r.1 coexpression data)

Top 50 enrichment test to 111206317 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**