Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_12g557800v5   uncharacterized protein 
 ath-u.5   AT1G29850   double-stranded DNA-binding family protein 
 gma-u.5   100786356   DNA-binding protein DDB_G0278111 
 gma-u.5   100305716   uncharacterized LOC100305716 
 sly-u.5   101265990   DNA-binding protein 
 osa-u.5   9269971   uncharacterized LOC9269971 
 zma-u.5   100280625   uncharacterized LOC100280625 
 zma-u.5   103635288   programmed cell death protein 5 
 vvi-u.5   100245316   uncharacterized LOC100245316 
 ppo-u.5   18095295   uncharacterized LOC18095295 
 mtr-u.5   25493385   DNA-binding protein DDB_G0278111 

close


Top 50 coexpressed genes to CHLRE_12g557800v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to CHLRE_12g557800v5 (cre-r.1 coexpression data)

CoexMap"5728375"


creCHLRE_12g557800v5 | Entrez gene ID : 5728375      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005829 [list] [network] cytosol  (481 genes)  IEA  
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0003677 [list] [network] DNA binding  (670 genes)  IEA  
Protein XP_001702825.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 3,  mito 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_001702825.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for XP_001702825.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_12g557800v5

.
ath-u.5
for
AT1G29850

.
gma-u.5
for
100786356

.
gma-u.5
for
100305716

.
sly-u.5
for
101265990

.
osa-u.5
for
9269971

.
zma-u.5
for
100280625

.
zma-u.5
for
103635288

.
vvi-u.5
for
100245316

.
ppo-u.5
for
18095295

.
mtr-u.5
for
25493385

.


Ortholog ID: 5420
Species ath gma gma sly osa zma zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G29850 LOC100305716 LOC100786356 LOC101265990 LOC9269971 LOC100280625 LOC103635288 LOC103835253 LOC100245316 LOC18095295 LOC25493385 LOC123182873 LOC123065791 LOC123447841 LOC107935878 LOC107913141 LOC106361607 LOC125594893 CHLRE_12g557800v5 LOC8069004 LOC102592706 LOC102628872 LOC100842744 LOC107797368 LOC107829137
Function* double-stranded DNA-binding family protein uncharacterized LOC100305716 DNA-binding protein DDB_G0278111 DNA-binding protein uncharacterized LOC9269971 uncharacterized LOC100280625 programmed cell death protein 5 seipin-2 uncharacterized LOC100245316 uncharacterized LOC18095295 DNA-binding protein DDB_G0278111 DNA-binding protein DDB_G0278111 DNA-binding protein DDB_G0278111 uncharacterized LOC123447841 DNA-binding protein DDB_G0278111 DNA-binding protein DDB_G0278111 DNA-binding protein DDB_G0278111-like DNA-binding protein DDB_G0278111-like uncharacterized protein DNA-binding protein DDB_G0278111 DNA-binding protein DDB_G0278111 uncharacterized LOC102628872 DNA-binding protein DDB_G0278111 uncharacterized LOC107797368 uncharacterized LOC107829137
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath04144 Endocytosis 3
ath04626 Plant-pathogen interaction 2
ath03020 RNA polymerase 2
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03420 Nucleotide excision repair 2
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 4
sly03020 RNA polymerase 2
sly03420 Nucleotide excision repair 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 7
zma03013 Nucleocytoplasmic transport 2
zma03083 Polycomb repressive complex 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04145 Phagosome 5
ppo04144 Endocytosis 4
ppo04148 Efferocytosis 4
ppo03050 Proteasome 3
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 6
mtr04120 Ubiquitin mediated proteolysis 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 4
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 2
hvu03420 Nucleotide excision repair 2
hvu04144 Endocytosis 2
hvu04145 Phagosome 2
hvu04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 10
ghi03083 Polycomb repressive complex 8
ghi04141 Protein processing in endoplasmic reticulum 8
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 10
ghi03083 Polycomb repressive complex 8
ghi04141 Protein processing in endoplasmic reticulum 8
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna00270 Cysteine and methionine metabolism 2
bna04144 Endocytosis 2
bna04145 Phagosome 2
bna04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
sbi03013 Nucleocytoplasmic transport 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04148 Efferocytosis 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03060 Protein export 3
bdi03050 Proteasome 2
bdi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 16
nta00230 Purine metabolism 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839863 100305716 100786356 101265990 9269971 100280625 103635288 103835253 100245316 18095295 25493385 123182873 123065791 123447841 107935878 107913141 106361607 125594893 5728375 8069004 102592706 102628872 100842744 107797368 107829137
The preparation time of this page was 0.1 [sec].