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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   111211898   E3 ubiquitin-protein ligase RNF25-like 
 ath-u.5   AT3G60300   RWD domain-containing protein 
 gma-u.5   100791789   E3 ubiquitin-protein ligase RNF25-like 
 vvi-u.5   100253028   uncharacterized LOC100253028 
 ppo-u.5   7483799   uncharacterized LOC7483799 
 mtr-u.5   25500058   uncharacterized LOC25500058 
 mtr-u.5   11409565   uncharacterized LOC11409565 
 sly-u.5   101256805   uncharacterized LOC101256805 
 osa-u.5   4350739   uncharacterized LOC4350739 
 zma-u.5   100282323   uncharacterized LOC100282323 

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Top 50 coexpressed genes to 111211898 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 111211898 (bna-r.1 coexpression data)

CoexMap"111211898"


bnaLOC111211898 | Entrez gene ID : 111211898    
Species bna ath gma vvi ppo mtr sly osa zma hvu cit bra ghi sbi bdi nta tae cre sot
Paralog 1 1 1 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (1065 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (605 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_022568953.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1,  cyto 1,  mito 1,  chlo_mito 1  (predict for XP_022568953.2)
Subcellular
localization
TargetP
other 3  (predict for XP_022568953.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
111211898
ath-u.5
for
AT3G60300
gma-u.5
for
100791789
vvi-u.5
for
100253028
ppo-u.5
for
7483799
mtr-u.5
for
25500058
mtr-u.5
for
11409565
sly-u.5
for
101256805
osa-u.5
for
4350739
zma-u.5
for
100282323


Ortholog ID: 9547
Species bna bna bra ath ghi cit gma vvi ppo mtr mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC111215144 LOC106445103 LOC103862892 AT3G60300 LOC107945567 LOC102625474 LOC100791789 LOC100253028 LOC7483799 LOC25500058 LOC11409565 LOC101256805 LOC102600249 LOC107759680 LOC107775072 LOC4350739 LOC100282323 LOC123091999 LOC123097419 LOC123448484 LOC8071941 LOC100836806 CHLRE_13g581801v5
Function* E3 ubiquitin-protein ligase RNF25-like E3 ubiquitin-protein ligase RNF25 E3 ubiquitin-protein ligase RNF25 RWD domain-containing protein uncharacterized LOC107945567 hypothetical protein E3 ubiquitin-protein ligase RNF25-like uncharacterized LOC100253028 uncharacterized LOC7483799 uncharacterized LOC25500058 uncharacterized LOC11409565 uncharacterized LOC101256805 E3 ubiquitin-protein ligase RNF25 uncharacterized LOC107759680 uncharacterized LOC107775072 uncharacterized LOC4350739 uncharacterized LOC100282323 E3 ubiquitin-protein ligase RNF25 E3 ubiquitin-protein ligase RNF25 E3 ubiquitin-protein ligase RNF25 E3 ubiquitin-protein ligase RNF25 E3 ubiquitin-protein ligase RNF25 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 2
tae00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03022 Basal transcription factors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 111215144 106445103 103862892 825201 107945567 102625474 100791789 100253028 7483799 25500058 11409565 101256805 102600249 107759680 107775072 4350739 100282323 123091999 123097419 123448484 8071941 100836806 5719329
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