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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   112323893   cytochrome c 
 ppo-r.4   112323893   cytochrome c 
 ppo-u.5   7475768   cytochrome c 
 gma-u.5   100500015   uncharacterized LOC100500015 
 gma-u.5   100305937   uncharacterized LOC100305937 
 gma-u.5   100817799   cytochrome c 
 mtr-u.5   25498920   cytochrome c 
 mtr-u.5   25498919   cytochrome c-2 
 mtr-u.5   11436188   cytochrome c 
 ath-u.5   CYTC-2   cytochrome c-2 
 ath-u.5   CYTC-1   CYTOCHROME C-1 
 bra-r.6   103858550   cytochrome c-2 
 bra-r.6   103829307   cytochrome c 
 bra-r.6   103840824   cytochrome c 
 vvi-u.5   100266092   cytochrome c 
 vvi-u.5   100243029   mitochondrial cytochrome c 
 ghi-r.1   107908554   cytochrome c 
 ghi-r.1   107914024   cytochrome c 
 ghi-r.1   107919547   cytochrome c 
 bna-r.1   106401631   cytochrome c 
 bna-r.1   106401187   cytochrome c-like 
 bna-r.1   106411021   cytochrome c 
 cit-r.1   102617830   cytochrome c-2-like 
 cit-r.1   102618527   cytochrome c 
 sly-u.5   101264887   cytochrome c 
 sly-u.5   101261271   cytochrome c 
 sot-r.1   102582196   cytochrome c-like 
 nta-r.1   107777542   cytochrome c 
 nta-r.1   107808274   cytochrome c-like 
 nta-r.1   107789084   cytochrome c 
 osa-u.5   4324880   cytochrome c 
 osa-u.5   4338825   cytochrome c-like 
 zma-u.5   100277932   cytochrome c 
 zma-u.5   100501351   cytochrome c-like 
 tae-r.2   123056447   cytochrome c 
 tae-r.2   123058939   cytochrome c 
 hvu-r.1   123442708   cytochrome c 
 sbi-r.1   8076974   cytochrome c 
 sbi-r.1   8061477   cytochrome c 
 bdi-r.1   100826967   cytochrome c 
 cre-r.1   CHLRE_12g522600v5   uncharacterized protein 

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Top 50 coexpressed genes to 112323893 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 112323893 (ppo-u.5 coexpression data)

CoexMap"112323893"


ppoLOC112323893 | Entrez gene ID : 112323893    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 3 3 2 3 2 3 3 2 2 1 3 2 2 2 1 2 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00190 [list] [network] Oxidative phosphorylation (178 genes)
GO BP
GO:0006123 [list] [network] mitochondrial electron transport, cytochrome c to oxygen  (6 genes)  IEA  
GO:0006122 [list] [network] mitochondrial electron transport, ubiquinol to cytochrome c  (16 genes)  IEA  
GO CC
GO:0005758 [list] [network] mitochondrial intermembrane space  (5 genes)  IEA  
GO MF
GO:0009055 [list] [network] electron transfer activity  (101 genes)  IEA  
GO:0020037 [list] [network] heme binding  (439 genes)  IEA  
Protein XP_024439674.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 9  (predict for XP_024439674.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for XP_024439674.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
112323893
ppo-r.4
for
112323893
ppo-u.5
for
7475768
gma-u.5
for
100500015
gma-u.5
for
100305937
gma-u.5
for
100817799
mtr-u.5
for
25498920
mtr-u.5
for
25498919
mtr-u.5
for
11436188
ath-u.5
for
CYTC-2
ath-u.5
for
CYTC-1
bra-r.6
for
103858550
bra-r.6
for
103829307
bra-r.6
for
103840824
vvi-u.5
for
100266092
vvi-u.5
for
100243029
ghi-r.1
for
107908554
ghi-r.1
for
107914024
ghi-r.1
for
107919547
bna-r.1
for
106401631
bna-r.1
for
106401187
bna-r.1
for
106411021
cit-r.1
for
102617830
cit-r.1
for
102618527
sly-u.5
for
101264887
sly-u.5
for
101261271
sot-r.1
for
102582196
nta-r.1
for
107777542
nta-r.1
for
107808274
nta-r.1
for
107789084
osa-u.5
for
4324880
osa-u.5
for
4338825
zma-u.5
for
100277932
zma-u.5
for
100501351
tae-r.2
for
123056447
tae-r.2
for
123058939
hvu-r.1
for
123442708
sbi-r.1
for
8076974
sbi-r.1
for
8061477
bdi-r.1
for
100826967
cre-r.1
for
CHLRE_12g522600v5


Ortholog ID: 2091
Species ppo ppo gma gma gma mtr mtr mtr ath ath bra bra bra vvi vvi ghi ghi ghi bna bna bna cit cit sly sly sot nta nta nta osa osa zma zma tae tae tae hvu sbi sbi bdi cre
Symbol LOC112323893 LOC7475768 LOC100500015 LOC100305937 LOC100817799 LOC25498920 LOC25498919 LOC11436188 CYTC-2 CYTC-1 LOC103858550 LOC103829307 LOC103840824 LOC100266092 LOC100243029 LOC107914024 LOC107898679 LOC107904786 LOC106411021 LOC106429774 LOC106436435 LOC102617830 LOC102618527 LOC101264887 LOC101261271 LOC102582196 LOC107777542 LOC107808274 LOC107789084 LOC4324880 LOC4338825 LOC100277932 LOC100501351 LOC123056447 LOC123133728 LOC123075160 LOC123442708 LOC8076974 LOC8061477 LOC100826967 CHLRE_12g522600v5
Function* cytochrome c cytochrome c uncharacterized LOC100500015 uncharacterized LOC100305937 cytochrome c cytochrome c cytochrome c-2 cytochrome c cytochrome c-2 CYTOCHROME C-1 cytochrome c-2 cytochrome c cytochrome c cytochrome c mitochondrial cytochrome c cytochrome c cytochrome c cytochrome c cytochrome c cytochrome c-like cytochrome c-2 cytochrome c-2-like cytochrome c cytochrome c cytochrome c cytochrome c-like cytochrome c cytochrome c-like cytochrome c cytochrome c cytochrome c-like cytochrome c cytochrome c-like cytochrome c cytochrome c-like cytochrome c cytochrome c cytochrome c cytochrome c cytochrome c uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 5
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 6
ppo03010 Ribosome 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 8
gma01240 Biosynthesis of cofactors 3
gma00740 Riboflavin metabolism 2
gma04144 Endocytosis 2
gma04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 3
gma04148 Efferocytosis 3
gma04141 Protein processing in endoplasmic reticulum 3
gma04144 Endocytosis 3
gma04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 11
mtr00020 Citrate cycle (TCA cycle) 2
mtr00640 Propanoate metabolism 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 8
mtr00020 Citrate cycle (TCA cycle) 2
mtr00640 Propanoate metabolism 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 8
ath00020 Citrate cycle (TCA cycle) 3
ath01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 3
bra01200 Carbon metabolism 3
bra00020 Citrate cycle (TCA cycle) 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
bra00020 Citrate cycle (TCA cycle) 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 9
bra00020 Citrate cycle (TCA cycle) 4
bra01200 Carbon metabolism 4
bra01210 2-Oxocarboxylic acid metabolism 4
bra00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 10
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 5
vvi03018 RNA degradation 3
vvi00020 Citrate cycle (TCA cycle) 3
vvi01200 Carbon metabolism 3
vvi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 5
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 4
ghi04626 Plant-pathogen interaction 4
ghi00020 Citrate cycle (TCA cycle) 2
ghi00480 Glutathione metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00380 Tryptophan metabolism 3
ghi00966 Glucosinolate biosynthesis 3
ghi01210 2-Oxocarboxylic acid metabolism 3
ghi00190 Oxidative phosphorylation 2
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 6
bna00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 6
bna00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00330 Arginine and proline metabolism 7
bna00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot03013 Nucleocytoplasmic transport 4
sot00480 Glutathione metabolism 3
sot03250 Viral life cycle - HIV-1 3
sot00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 3
nta04141 Protein processing in endoplasmic reticulum 3
nta00750 Vitamin B6 metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00020 Citrate cycle (TCA cycle) 4
nta00310 Lysine degradation 4
nta00380 Tryptophan metabolism 4
nta00785 Lipoic acid metabolism 4
nta01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 6
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 7
osa00020 Citrate cycle (TCA cycle) 6
osa01210 2-Oxocarboxylic acid metabolism 4
osa01230 Biosynthesis of amino acids 4
osa00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 4
zma00020 Citrate cycle (TCA cycle) 2
zma00270 Cysteine and methionine metabolism 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 9
zma04142 Lysosome 2
zma04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 4
tae00051 Fructose and mannose metabolism 3
tae00500 Starch and sucrose metabolism 3
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 5
tae01200 Carbon metabolism 5
tae01210 2-Oxocarboxylic acid metabolism 5
tae00630 Glyoxylate and dicarboxylate metabolism 4
tae01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 5
hvu01200 Carbon metabolism 4
hvu00010 Glycolysis / Gluconeogenesis 3
hvu00710 Carbon fixation by Calvin cycle 3
hvu01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00020 Citrate cycle (TCA cycle) 2
sbi01200 Carbon metabolism 2
sbi01240 Biosynthesis of cofactors 2
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 3
sbi00020 Citrate cycle (TCA cycle) 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 3
cre03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 112323893 7475768 100500015 100305937 100817799 25498920 25498919 11436188 826595 838889 103858550 103829307 103840824 100266092 100243029 107914024 107898679 107904786 106411021 106429774 106436435 102617830 102618527 101264887 101261271 102582196 107777542 107808274 107789084 4324880 4338825 100277932 100501351 123056447 123133728 123075160 123442708 8076974 8061477 100826967 5722552
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