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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7475768   cytochrome c 
 ppo-r.4   7475768   cytochrome c 
 ppo-u.5   112323893   cytochrome c 
 gma-u.5   100817799   cytochrome c 
 gma-u.5   100500015   uncharacterized LOC100500015 
 gma-u.5   100305937   uncharacterized LOC100305937 
 mtr-u.5   11436188   cytochrome c 
 mtr-u.5   25498920   cytochrome c 
 mtr-u.5   25498919   cytochrome c-2 
 ath-u.5   CYTC-2   cytochrome c-2 
 ath-u.5   CYTC-1   CYTOCHROME C-1 
 vvi-u.5   100266092   cytochrome c 
 vvi-u.5   100243029   mitochondrial cytochrome c 
 sly-u.5   101264887   cytochrome c 
 sly-u.5   101261271   cytochrome c 
 osa-u.5   4324880   cytochrome c 
 osa-u.5   4338825   cytochrome c-like 
 zma-u.5   100501351   cytochrome c-like 
 zma-u.5   100383938   cytochrome c 

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Top 50 coexpressed genes to 7475768 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7475768 (ppo-u.5 coexpression data)

CoexMap"7475768"


ppoLOC7475768 | Entrez gene ID : 7475768    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 3 3 2 2 2 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00190 [list] [network] Oxidative phosphorylation (178 genes)
GO BP
GO:0006123 [list] [network] mitochondrial electron transport, cytochrome c to oxygen  (6 genes)  IEA  
GO:0006122 [list] [network] mitochondrial electron transport, ubiquinol to cytochrome c  (16 genes)  IEA  
GO CC
GO:0005758 [list] [network] mitochondrial intermembrane space  (5 genes)  IEA  
GO MF
GO:0009055 [list] [network] electron transfer activity  (101 genes)  IEA  
GO:0020037 [list] [network] heme binding  (439 genes)  IEA  
Protein XP_002325524.4 [sequence] [blastp]
XP_006387452.2 [sequence] [blastp]
XP_052305395.1 [sequence] [blastp]
XP_052305396.1 [sequence] [blastp]
XP_052305397.1 [sequence] [blastp]
XP_052305398.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 9  (predict for XP_002325524.4)
mito 9  (predict for XP_006387452.2)
mito 9  (predict for XP_052305395.1)
mito 9  (predict for XP_052305396.1)
mito 9  (predict for XP_052305397.1)
mito 9  (predict for XP_052305398.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002325524.4)
other 8  (predict for XP_006387452.2)
other 8  (predict for XP_052305395.1)
other 8  (predict for XP_052305396.1)
other 8  (predict for XP_052305397.1)
other 8  (predict for XP_052305398.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7475768

.
ppo-r.4
for
7475768

.
ppo-u.5
for
112323893

.
gma-u.5
for
100817799

.
gma-u.5
for
100500015

.
gma-u.5
for
100305937

.
mtr-u.5
for
11436188

.
mtr-u.5
for
25498920

.
mtr-u.5
for
25498919

.
ath-u.5
for
CYTC-2

.
ath-u.5
for
CYTC-1

.
vvi-u.5
for
100266092

.
vvi-u.5
for
100243029

.
sly-u.5
for
101264887

.
sly-u.5
for
101261271

.
osa-u.5
for
4324880

.
osa-u.5
for
4338825

.
zma-u.5
for
100501351

.
zma-u.5
for
100383938

.


Ortholog ID: 2091
Species ath ath gma gma sly sly osa zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit cit bdi nta nta
Symbol CYTC-2 CYTC-1 LOC100305937 LOC100500015 LOC101261271 LOC101264887 LOC4324880 LOC100501351 LOC103840824 LOC103829307 LOC100243029 LOC100266092 LOC112323893 LOC7475768 LOC25498919 LOC25498920 LOC123133728 LOC123056447 LOC123442708 LOC107904786 LOC107914024 LOC106411021 LOC106429774 CHLRE_12g522600v5 LOC8061477 LOC102582196 LOC102618527 LOC102617830 LOC100826967 LOC107777542 LOC107808274
Function* cytochrome c-2 CYTOCHROME C-1 uncharacterized LOC100305937 uncharacterized LOC100500015 cytochrome c cytochrome c cytochrome c cytochrome c-like cytochrome c cytochrome c mitochondrial cytochrome c cytochrome c cytochrome c cytochrome c cytochrome c-2 cytochrome c cytochrome c-like cytochrome c cytochrome c cytochrome c cytochrome c cytochrome c cytochrome c-like uncharacterized protein cytochrome c cytochrome c-like cytochrome c cytochrome c-2-like cytochrome c cytochrome c cytochrome c-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 8
ath00020 Citrate cycle (TCA cycle) 3
ath01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 8
gma01240 Biosynthesis of cofactors 3
gma00740 Riboflavin metabolism 2
gma04144 Endocytosis 2
gma04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 6
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 9
zma04142 Lysosome 2
zma04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 9
bra00020 Citrate cycle (TCA cycle) 4
bra01200 Carbon metabolism 4
bra01210 2-Oxocarboxylic acid metabolism 4
bra00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
bra00020 Citrate cycle (TCA cycle) 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 5
vvi03018 RNA degradation 3
vvi00020 Citrate cycle (TCA cycle) 3
vvi01200 Carbon metabolism 3
vvi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 10
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 5
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 6
ppo03010 Ribosome 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 11
mtr00020 Citrate cycle (TCA cycle) 2
mtr00640 Propanoate metabolism 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 5
tae01200 Carbon metabolism 5
tae01210 2-Oxocarboxylic acid metabolism 5
tae00630 Glyoxylate and dicarboxylate metabolism 4
tae01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 4
tae00051 Fructose and mannose metabolism 3
tae00500 Starch and sucrose metabolism 3
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 5
hvu01200 Carbon metabolism 4
hvu00010 Glycolysis / Gluconeogenesis 3
hvu00710 Carbon fixation by Calvin cycle 3
hvu01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00380 Tryptophan metabolism 3
ghi00966 Glucosinolate biosynthesis 3
ghi01210 2-Oxocarboxylic acid metabolism 3
ghi00190 Oxidative phosphorylation 2
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 5
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 6
bna00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 6
bna00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 3
cre03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 3
sbi00020 Citrate cycle (TCA cycle) 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot03013 Nucleocytoplasmic transport 4
sot00480 Glutathione metabolism 3
sot03250 Viral life cycle - HIV-1 3
sot00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 3
nta04141 Protein processing in endoplasmic reticulum 3
nta00750 Vitamin B6 metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826595 838889 100305937 100500015 101261271 101264887 4324880 100501351 103840824 103829307 100243029 100266092 112323893 7475768 25498919 25498920 123133728 123056447 123442708 107904786 107914024 106411021 106429774 5722552 8061477 102582196 102618527 102617830 100826967 107777542 107808274
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