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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   112327152   transcription termination factor MTERF6, chloroplastic/mitochondrial 
 ppo-r.4   112327152   transcription termination factor MTERF6, chloroplastic/mitochondrial 
 gma-u.5   100816929   uncharacterized LOC100816929 
 gma-u.5   100793256   transcription termination factor MTERF6, chloroplastic/mitochondrial 
 mtr-u.5   25492996   transcription termination factor MTERF6, chloroplastic/mitochondrial 
 ath-u.5   pde191   Mitochondrial transcription termination factor family protein 
 bra-r.6   103860753   transcription termination factor MTERF6, chloroplastic/mitochondrial 
 vvi-u.5   100252027   transcription termination factor MTERF6, chloroplastic/mitochondrial 
 ghi-r.1   107919825   transcription termination factor MTERF6, chloroplastic/mitochondrial 
 ghi-r.1   107894014   transcription termination factor MTERF6, chloroplastic/mitochondrial 
 bna-r.1   106448489   transcription termination factor MTERF6, chloroplastic/mitochondrial 
 bna-r.1   BNAC07G32790D   transcription termination factor MTERF6, chloroplastic/mitochondrial 
 cit-r.1   102627586   transcription termination factor MTERF6, chloroplastic/mitochondrial 
 sly-u.5   101248448   mTERF family protein 
 sot-r.1   102585837   uncharacterized LOC102585837 
 nta-r.1   107785331   transcription termination factor MTERF6, chloroplastic/mitochondrial 
 nta-r.1   107830658   transcription termination factor MTERF6, chloroplastic/mitochondrial-like 
 osa-u.5   4346032   transcription termination factor MTERF6, chloroplastic/mitochondrial 
 zma-u.5   100286256   uncharacterized LOC100286256 
 tae-r.2   123164972   transcription termination factor MTERF6, chloroplastic/mitochondrial 
 tae-r.2   123157755   transcription termination factor MTERF6, chloroplastic/mitochondrial 
 tae-r.2   123151356   transcription termination factor MTERF6, chloroplastic/mitochondrial 
 hvu-r.1   123411124   transcription termination factor MTERF6, chloroplastic/mitochondrial 
 sbi-r.1   8064010   transcription termination factor MTERF6, chloroplastic/mitochondrial 
 bdi-r.1   100827502   transcription termination factor MTERF6, chloroplastic/mitochondrial 

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Top 50 coexpressed genes to 112327152 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 112327152 (ppo-u.5 coexpression data)

CoexMap"112327152"


ppoLOC112327152 | Entrez gene ID : 112327152    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 2 1 1 1 1 2 2 1 1 1 2 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1948 genes)  IEA  
GO CC
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (569 genes)  IEA  
Protein XP_024454461.1 [sequence] [blastp]
XP_052307997.1 [sequence] [blastp]
XP_052307998.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 10  (predict for XP_024454461.1)
cyto 10  (predict for XP_052307997.1)
cyto 10  (predict for XP_052307998.1)
Subcellular
localization
TargetP
other 7  (predict for XP_024454461.1)
other 7  (predict for XP_052307997.1)
other 7  (predict for XP_052307998.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
112327152
ppo-r.4
for
112327152
gma-u.5
for
100816929
gma-u.5
for
100793256
mtr-u.5
for
25492996
ath-u.5
for
pde191
bra-r.6
for
103860753
vvi-u.5
for
100252027
ghi-r.1
for
107919825
ghi-r.1
for
107894014
bna-r.1
for
106448489
bna-r.1
for
BNAC07G32790D
cit-r.1
for
102627586
sly-u.5
for
101248448
sot-r.1
for
102585837
nta-r.1
for
107785331
nta-r.1
for
107830658
osa-u.5
for
4346032
zma-u.5
for
100286256
tae-r.2
for
123164972
tae-r.2
for
123157755
tae-r.2
for
123151356
hvu-r.1
for
123411124
sbi-r.1
for
8064010
bdi-r.1
for
100827502


Ortholog ID: 10264
Species ppo gma gma mtr ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC112327152 LOC100816929 LOC100793256 LOC25492996 pde191 LOC103860753 LOC100252027 LOC107919825 LOC107894014 LOC106448489 BNAC07G32790D LOC102627586 LOC101248448 LOC102585837 LOC107785331 LOC107830658 LOC4346032 LOC100286256 LOC123164972 LOC123157755 LOC123151356 LOC123411124 LOC8064010 LOC100827502
Function* transcription termination factor MTERF6, chloroplastic/mitochondrial uncharacterized LOC100816929 transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF6, chloroplastic/mitochondrial Mitochondrial transcription termination factor family protein transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF6, chloroplastic/mitochondrial mTERF family protein uncharacterized LOC102585837 transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF6, chloroplastic/mitochondrial-like transcription termination factor MTERF6, chloroplastic/mitochondrial uncharacterized LOC100286256 transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF6, chloroplastic/mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
ghi00860 Porphyrin metabolism 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
ghi00860 Porphyrin metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna00860 Porphyrin metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
bna00860 Porphyrin metabolism 4
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 6
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 10
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 7
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 112327152 100816929 100793256 25492996 829972 103860753 100252027 107919825 107894014 106448489 106409516 102627586 101248448 102585837 107785331 107830658 4346032 100286256 123164972 123157755 123151356 123411124 8064010 100827502
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