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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   pde191   Mitochondrial transcription termination factor family protein 
 ath-r.7   pde191   Mitochondrial transcription termination factor family protein 
 ath-m.9   pde191   Mitochondrial transcription termination factor family protein 
 ath-e.2   pde191   Mitochondrial transcription termination factor family protein 
 ath-m.4.bio   pde191   Mitochondrial transcription termination factor family protein 
 ath-m.4.hor   pde191   Mitochondrial transcription termination factor family protein 
 ath-m.4.lig   pde191   Mitochondrial transcription termination factor family protein 
 ath-m.4.str   pde191   Mitochondrial transcription termination factor family protein 
 ath-m.4.tis   pde191   Mitochondrial transcription termination factor family protein 
 gma-u.5   100816929   uncharacterized LOC100816929 
 gma-u.5   100793256   transcription termination factor MTERF6, chloroplastic/mitochondrial 
 vvi-u.5   100252027   transcription termination factor MTERF6, chloroplastic/mitochondrial 
 ppo-u.5   112327152   transcription termination factor MTERF6, chloroplastic/mitochondrial 
 mtr-u.5   25492996   transcription termination factor MTERF6, chloroplastic/mitochondrial 
 sly-u.5   101248448   mTERF family protein 
 osa-u.5   4346032   transcription termination factor MTERF6, chloroplastic/mitochondrial 
 zma-u.5   100286256   uncharacterized LOC100286256 

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Top 50 coexpressed genes to pde191 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to pde191 (ath-u.5 coexpression data)

CoexMap"829972"


athpde191 | Entrez gene ID : 829972      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 9 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0008033 [list] [network] tRNA processing  (58 genes)  IMP  
GO:0009658 [list] [network] chloroplast organization  (197 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  IEA  
GO CC
GO:0042651 [list] [network] thylakoid membrane  (348 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  IDA ISM  
GO:0009507 [list] [network] chloroplast  (5014 genes)  IDA ISM  
GO MF
GO:0003727 [list] [network] single-stranded RNA binding  (56 genes)  IDA  
GO:0003690 [list] [network] double-stranded DNA binding  (800 genes)  IDA IEA  
GO:0003677 [list] [network] DNA binding  (1274 genes)  IDA  
GO:0003723 [list] [network] RNA binding  (1764 genes)  IDA  
Protein NP_001190948.1 [sequence] [blastp]
NP_001320159.1 [sequence] [blastp]
NP_195529.1 [sequence] [blastp]
NP_974703.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 2,  pero 2  (predict for NP_001190948.1)
chlo 4,  cyto 4,  nucl 1,  extr 1,  pero 1  (predict for NP_001320159.1)
chlo 4,  cyto 4,  nucl 1,  extr 1,  pero 1  (predict for NP_195529.1)
chlo 5,  cyto 4,  nucl 1,  pero 1  (predict for NP_974703.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001190948.1)
other 9  (predict for NP_001320159.1)
other 9  (predict for NP_195529.1)
other 9  (predict for NP_974703.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
pde191
ath-r.7
for
pde191
ath-m.9
for
pde191
ath-e.2
for
pde191
ath-m.4.bio
for
pde191
ath-m.4.hor
for
pde191
ath-m.4.lig
for
pde191
ath-m.4.str
for
pde191
ath-m.4.tis
for
pde191
gma-u.5
for
100816929
gma-u.5
for
100793256
vvi-u.5
for
100252027
ppo-u.5
for
112327152
mtr-u.5
for
25492996
sly-u.5
for
101248448
osa-u.5
for
4346032
zma-u.5
for
100286256


Ortholog ID: 10264
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol pde191 LOC103860753 BNAC07G32790D LOC106448489 LOC107919825 LOC107894014 LOC102627586 LOC100816929 LOC100793256 LOC100252027 LOC112327152 LOC25492996 LOC101248448 LOC102585837 LOC107785331 LOC107830658 LOC4346032 LOC100286256 LOC123164972 LOC123157755 LOC123411124 LOC8064010 LOC100827502
Function* Mitochondrial transcription termination factor family protein transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF6, chloroplastic/mitochondrial uncharacterized LOC100816929 transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF6, chloroplastic/mitochondrial mTERF family protein uncharacterized LOC102585837 transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF6, chloroplastic/mitochondrial-like transcription termination factor MTERF6, chloroplastic/mitochondrial uncharacterized LOC100286256 transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF6, chloroplastic/mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
bna00860 Porphyrin metabolism 4
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna00860 Porphyrin metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
ghi00860 Porphyrin metabolism 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
ghi00860 Porphyrin metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 6
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 10
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 7
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829972 103860753 106409516 106448489 107919825 107894014 102627586 100816929 100793256 100252027 112327152 25492996 101248448 102585837 107785331 107830658 4346032 100286256 123164972 123157755 123411124 8064010 100827502
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