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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   112416806   poly(A)-specific ribonuclease PARN-like 
 mtr-r.5   112416806   poly(A)-specific ribonuclease PARN-like 
 gma-u.5   100803008   poly(A)-specific ribonuclease PARN-like 
 ppo-u.5   7464439   poly(A)-specific ribonuclease PARN-like 
 ath-u.5   AT3G25430   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 bra-r.6   103828556   poly(A)-specific ribonuclease PARN-like 
 vvi-u.5   100855155   poly(A)-specific ribonuclease PARN-like 
 ghi-r.1   107912511   poly(A)-specific ribonuclease PARN-like 
 ghi-r.1   107922763   poly(A)-specific ribonuclease PARN-like 
 bna-r.1   106402671   poly(A)-specific ribonuclease PARN-like 
 bna-r.1   106366680   poly(A)-specific ribonuclease PARN-like 
 cit-r.1   102621635   poly(A)-specific ribonuclease PARN-like 
 sly-u.5   101264368   poly(A)-specific ribonuclease PARN-like 
 sot-r.1   102578752   poly(A)-specific ribonuclease PARN-like 
 nta-r.1   107794392   poly(A)-specific ribonuclease PARN-like 
 nta-r.1   107775406   poly(A)-specific ribonuclease PARN-like 
 osa-u.5   4345682   poly(A)-specific ribonuclease PARN-like 
 tae-r.2   123102268   poly(A)-specific ribonuclease PARN-like 
 tae-r.2   123110467   poly(A)-specific ribonuclease PARN-like 
 tae-r.2   123119454   poly(A)-specific ribonuclease PARN-like 
 hvu-r.1   123398014   poly(A)-specific ribonuclease PARN-like 
 sbi-r.1   8080603   poly(A)-specific ribonuclease PARN-like 
 bdi-r.1   100841345   poly(A)-specific ribonuclease PARN-like 

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Top 50 coexpressed genes to 112416806 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 112416806 (mtr-u.5 coexpression data)

CoexMap"112416806"


mtrLOC112416806 | Entrez gene ID : 112416806    
Species mtr gma ppo ath bra vvi ghi bna cit sly sot nta osa tae hvu sbi bdi zma cre
Paralog 2 1 1 1 1 1 2 2 1 1 1 2 1 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG mtr03018 [list] [network] RNA degradation (117 genes)
GO BP
GO CC
GO MF
GO:0000175 [list] [network] 3'-5'-RNA exonuclease activity  (37 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
Protein XP_024627337.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  extr 1,  vacu 1,  cyto_nucl 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_024627337.1)
Subcellular
localization
TargetP
chlo 3  (predict for XP_024627337.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
112416806
mtr-r.5
for
112416806
gma-u.5
for
100803008
ppo-u.5
for
7464439
ath-u.5
for
AT3G25430
bra-r.6
for
103828556
vvi-u.5
for
100855155
ghi-r.1
for
107912511
ghi-r.1
for
107922763
bna-r.1
for
106402671
bna-r.1
for
106366680
cit-r.1
for
102621635
sly-u.5
for
101264368
sot-r.1
for
102578752
nta-r.1
for
107794392
nta-r.1
for
107775406
osa-u.5
for
4345682
tae-r.2
for
123102268
tae-r.2
for
123110467
tae-r.2
for
123119454
hvu-r.1
for
123398014
sbi-r.1
for
8080603
bdi-r.1
for
100841345


Ortholog ID: 11687
Species mtr gma ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta osa tae tae tae hvu sbi bdi
Symbol LOC112416806 LOC100803008 LOC7464439 AT3G25430 LOC103828556 LOC100855155 LOC107912511 LOC107922763 LOC106402671 LOC106366680 LOC102621635 LOC101264368 LOC102578752 LOC107794392 LOC107775406 LOC4345682 LOC123102268 LOC123110467 LOC123119454 LOC123398014 LOC8080603 LOC100841345
Function* poly(A)-specific ribonuclease PARN-like poly(A)-specific ribonuclease PARN-like poly(A)-specific ribonuclease PARN-like Polynucleotidyl transferase, ribonuclease H-like superfamily protein poly(A)-specific ribonuclease PARN-like poly(A)-specific ribonuclease PARN-like poly(A)-specific ribonuclease PARN-like poly(A)-specific ribonuclease PARN-like poly(A)-specific ribonuclease PARN-like poly(A)-specific ribonuclease PARN-like poly(A)-specific ribonuclease PARN-like poly(A)-specific ribonuclease PARN-like poly(A)-specific ribonuclease PARN-like poly(A)-specific ribonuclease PARN-like poly(A)-specific ribonuclease PARN-like poly(A)-specific ribonuclease PARN-like poly(A)-specific ribonuclease PARN-like poly(A)-specific ribonuclease PARN-like poly(A)-specific ribonuclease PARN-like poly(A)-specific ribonuclease PARN-like poly(A)-specific ribonuclease PARN-like poly(A)-specific ribonuclease PARN-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
bra03018 RNA degradation 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03015 mRNA surveillance pathway 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03015 mRNA surveillance pathway 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
bna03440 Homologous recombination 2
bna03450 Non-homologous end-joining 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
bna03440 Homologous recombination 2
bna03450 Non-homologous end-joining 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
bdi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 112416806 100803008 7464439 822127 103828556 100855155 107912511 107922763 106402671 106366680 102621635 101264368 102578752 107794392 107775406 4345682 123102268 123110467 123119454 123398014 8080603 100841345
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