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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11405596   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 mtr-r.5   11405596   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 mtr-m.5   11405596   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 gma-u.5   100812377   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 gma-u.5   100787182   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 ppo-u.5   7487686   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 ppo-u.5   18108079   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 ath-u.5   AT2G37690   phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase 
 bra-r.6   103865624   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 bra-r.6   103857728   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 vvi-u.5   100250122   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 ghi-r.1   121225607   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 ghi-r.1   107949056   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 ghi-r.1   107926745   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 bna-r.1   125585663   phosphoribosylaminoimidazole carboxylase, chloroplastic-like 
 bna-r.1   125601293   phosphoribosylaminoimidazole carboxylase, chloroplastic-like 
 bna-r.1   106427767   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 cit-r.1   102626933   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 sly-u.5   101255944   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 sot-r.1   102597319   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 nta-r.1   107826110   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 nta-r.1   107783264   phosphoribosylaminoimidazole carboxylase, chloroplastic-like 
 osa-u.5   4327345   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 zma-u.5   103630165   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 zma-u.5   100501865   phosphoribosylaminoimidazole carboxylase family protein / AIR carboxylase family protein 
 tae-r.2   123077712   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 tae-r.2   123069188   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 tae-r.2   123060587   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 hvu-r.1   123443117   phosphoribosylaminoimidazole carboxylase, chloroplastic-like 
 sbi-r.1   8084329   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 bdi-r.1   100840405   phosphoribosylaminoimidazole carboxylase, chloroplastic 
 cre-r.1   CHLRE_12g503300v5   uncharacterized protein 

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Top 50 coexpressed genes to 11405596 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11405596 (mtr-u.5 coexpression data)

CoexMap"11405596"


mtrLOC11405596 | Entrez gene ID : 11405596      
Species mtr gma ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 2 1 2 1 3 3 1 1 1 2 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG mtr00230 [list] [network] Purine metabolism (100 genes)
GO BP
GO:0006189 [list] [network] 'de novo' IMP biosynthetic process  (10 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (642 genes)  IEA  
GO MF
GO:0004638 [list] [network] phosphoribosylaminoimidazole carboxylase activity  (1 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (2334 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2502 genes)  IEA  
Protein XP_003590992.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_003590992.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_003590992.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11405596
mtr-r.5
for
11405596
mtr-m.5
for
11405596
gma-u.5
for
100812377
gma-u.5
for
100787182
ppo-u.5
for
7487686
ppo-u.5
for
18108079
ath-u.5
for
AT2G37690
bra-r.6
for
103865624
bra-r.6
for
103857728
vvi-u.5
for
100250122
ghi-r.1
for
121225607
ghi-r.1
for
107949056
ghi-r.1
for
107926745
bna-r.1
for
125585663
bna-r.1
for
125601293
bna-r.1
for
106427767
cit-r.1
for
102626933
sly-u.5
for
101255944
sot-r.1
for
102597319
nta-r.1
for
107826110
nta-r.1
for
107783264
osa-u.5
for
4327345
zma-u.5
for
103630165
zma-u.5
for
100501865
tae-r.2
for
123077712
tae-r.2
for
123069188
tae-r.2
for
123060587
hvu-r.1
for
123443117
sbi-r.1
for
8084329
bdi-r.1
for
100840405
cre-r.1
for
CHLRE_12g503300v5


Ortholog ID: 6516
Species mtr gma gma ppo ppo ath bra bra vvi ghi ghi ghi bna bna bna cit sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC11405596 LOC100812377 LOC100787182 LOC7487686 LOC18108079 AT2G37690 LOC103865624 LOC103857728 LOC100250122 LOC121225607 LOC107949056 LOC107889325 LOC125601293 LOC106427767 LOC106392916 LOC102626933 LOC101255944 LOC102597319 LOC107826110 LOC107783264 LOC4327345 LOC103630165 LOC100501865 LOC123077712 LOC123069188 LOC123060587 LOC123443117 LOC8084329 LOC100840405 CHLRE_12g503300v5
Function* phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic-like phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic-like phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase family protein / AIR carboxylase family protein phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic-like phosphoribosylaminoimidazole carboxylase, chloroplastic phosphoribosylaminoimidazole carboxylase, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 5
mtr01230 Biosynthesis of amino acids 4
mtr00230 Purine metabolism 3
mtr00250 Alanine, aspartate and glutamate metabolism 3
mtr00240 Pyrimidine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma00500 Starch and sucrose metabolism 2
gma00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
ppo00230 Purine metabolism 2
ppo00220 Arginine biosynthesis 2
ppo00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
ath00230 Purine metabolism 2
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00230 Purine metabolism 4
bra01240 Biosynthesis of cofactors 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00230 Purine metabolism 5
bra00250 Alanine, aspartate and glutamate metabolism 3
bra01240 Biosynthesis of cofactors 3
bra01232 Nucleotide metabolism 2
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 6
ghi00290 Valine, leucine and isoleucine biosynthesis 4
ghi00620 Pyruvate metabolism 4
ghi01210 2-Oxocarboxylic acid metabolism 4
ghi00230 Purine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 4
ghi01230 Biosynthesis of amino acids 3
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 4
ghi01230 Biosynthesis of amino acids 3
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 5
bna00860 Porphyrin metabolism 5
bna01240 Biosynthesis of cofactors 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 5
bna03040 Spliceosome 4
bna00860 Porphyrin metabolism 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 5
bna00860 Porphyrin metabolism 5
bna01240 Biosynthesis of cofactors 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00230 Purine metabolism 3
sly00670 One carbon pool by folate 2
sly01230 Biosynthesis of amino acids 2
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta00230 Purine metabolism 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00230 Purine metabolism 8
zma01240 Biosynthesis of cofactors 3
zma03440 Homologous recombination 2
zma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00230 Purine metabolism 9
zma01240 Biosynthesis of cofactors 4
zma01232 Nucleotide metabolism 3
zma00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 8
tae03018 RNA degradation 2
tae03030 DNA replication 2
tae03410 Base excision repair 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 11
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 3
sbi04145 Phagosome 3
sbi01200 Carbon metabolism 2
sbi01230 Biosynthesis of amino acids 2
sbi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 4
bdi03010 Ribosome 3
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00230 Purine metabolism 6
cre00220 Arginine biosynthesis 4
cre01230 Biosynthesis of amino acids 4
cre01240 Biosynthesis of cofactors 4
cre01200 Carbon metabolism 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11405596 100812377 100787182 7487686 18108079 818346 103865624 103857728 100250122 121225607 107949056 107889325 125601293 106427767 106392916 102626933 101255944 102597319 107826110 107783264 4327345 103630165 100501865 123077712 123069188 123060587 123443117 8084329 100840405 5716425
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