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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11407190   pentatricopeptide repeat-containing protein At1g09190 
 mtr-r.5   11407190   pentatricopeptide repeat-containing protein At1g09190 
 mtr-m.5   11407190   pentatricopeptide repeat-containing protein At1g09190 
 mtr-u.5   11432005   pentatricopeptide repeat-containing protein At2g20540 
 gma-u.5   100805000   pentatricopeptide repeat-containing protein At1g09190 
 ath-u.5   AT1G09190   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   100258012   pentatricopeptide repeat-containing protein At1g09190 
 sly-u.5   101244713   pentatricopeptide repeat-containing protein 
 sly-u.5   101247663   pentatricopeptide repeat-containing protein At2g20540 
 osa-u.5   9268630   pentatricopeptide repeat-containing protein At2g20540 
 osa-u.5   4351099   pentatricopeptide repeat-containing protein At1g09190 
 zma-u.5   100280409   uncharacterized LOC100280409 

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Top 50 coexpressed genes to 11407190 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11407190 (mtr-u.5 coexpression data)

CoexMap"11407190"


mtrLOC11407190 | Entrez gene ID : 11407190      
Species mtr gma ath vvi sly osa zma bdi hvu bra cit bna ppo sbi ghi sot nta cre tae
Paralog 4 1 1 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (432 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_003591206.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 4,  cyto_mito 3  (predict for XP_003591206.1)
Subcellular
localization
TargetP
other 5  (predict for XP_003591206.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11407190
mtr-r.5
for
11407190
mtr-m.5
for
11407190
mtr-u.5
for
11432005
gma-u.5
for
100805000
ath-u.5
for
AT1G09190
vvi-u.5
for
100258012
sly-u.5
for
101244713
sly-u.5
for
101247663
osa-u.5
for
9268630
osa-u.5
for
4351099
zma-u.5
for
100280409


Ortholog ID: 4040
Species mtr mtr gma ath bra bra ghi ghi cit cit sly sly sot sot nta nta osa osa zma hvu sbi bdi
Symbol LOC11432005 LOC11407190 LOC100805000 AT1G09190 LOC103842597 LOC103871648 LOC107927178 LOC107887002 LOC102621282 LOC102617057 LOC101244713 LOC101247663 LOC102602131 LOC102580133 LOC107783794 LOC107825572 LOC4351099 LOC9268630 LOC100280409 LOC123446316 LOC8082854 LOC104582647
Function* pentatricopeptide repeat-containing protein At2g20540 pentatricopeptide repeat-containing protein At1g09190 pentatricopeptide repeat-containing protein At1g09190 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g20540 pentatricopeptide repeat-containing protein At1g09190 pentatricopeptide repeat-containing protein At1g09190 pentatricopeptide repeat-containing protein At1g09190 pentatricopeptide repeat-containing protein At2g20540 pentatricopeptide repeat-containing protein At1g09190 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At2g20540 pentatricopeptide repeat-containing protein At1g09190 pentatricopeptide repeat-containing protein At2g20540-like pentatricopeptide repeat-containing protein At1g09190-like pentatricopeptide repeat-containing protein At2g20540-like pentatricopeptide repeat-containing protein At1g09190 pentatricopeptide repeat-containing protein At2g20540 uncharacterized LOC100280409 pentatricopeptide repeat-containing protein At1g09190-like pentatricopeptide repeat-containing protein At2g20540 pentatricopeptide repeat-containing protein At2g20540-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03082 ATP-dependent chromatin remodeling 2
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
sbi00280 Valine, leucine and isoleucine degradation 2
sbi00410 beta-Alanine metabolism 2
sbi00640 Propanoate metabolism 2
sbi01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11432005 11407190 100805000 837439 103842597 103871648 107927178 107887002 102621282 102617057 101244713 101247663 102602131 102580133 107783794 107825572 4351099 9268630 100280409 123446316 8082854 104582647
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