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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8082854   pentatricopeptide repeat-containing protein At2g20540 
 zma-u.5   100280409   uncharacterized LOC100280409 
 osa-u.5   9268630   pentatricopeptide repeat-containing protein At2g20540 
 osa-u.5   4351099   pentatricopeptide repeat-containing protein At1g09190 
 ath-u.5   AT1G09190   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100805000   pentatricopeptide repeat-containing protein At1g09190 
 sly-u.5   101247663   pentatricopeptide repeat-containing protein At2g20540 
 sly-u.5   101244713   pentatricopeptide repeat-containing protein 
 vvi-u.5   100258012   pentatricopeptide repeat-containing protein At1g09190 
 mtr-u.5   11432005   pentatricopeptide repeat-containing protein At2g20540 
 mtr-u.5   11407190   pentatricopeptide repeat-containing protein At1g09190 

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Top 50 coexpressed genes to 8082854 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8082854 (sbi-r.1 coexpression data)

CoexMap"8082854"


sbiLOC8082854 | Entrez gene ID : 8082854      
Species sbi zma osa ath gma sly vvi mtr ppo hvu sot tae nta bra cit ghi bna bdi cre
Paralog 1 1 2 1 1 2 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002446813.1 [sequence] [blastp]
XP_002446814.2 [sequence] [blastp]
XP_021318190.1 [sequence] [blastp]
XP_021318191.1 [sequence] [blastp]
XP_021318192.1 [sequence] [blastp]
XP_021318193.1 [sequence] [blastp]
XP_021318194.1 [sequence] [blastp]
XP_021318195.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  pero 1  (predict for XP_002446813.1)
cyto 9,  pero 1  (predict for XP_002446814.2)
cyto 9,  pero 1  (predict for XP_021318190.1)
cyto 9,  pero 1  (predict for XP_021318191.1)
cyto 9,  pero 1  (predict for XP_021318192.1)
cyto 9,  pero 1  (predict for XP_021318193.1)
cyto 9,  pero 1  (predict for XP_021318194.1)
cyto 9,  pero 1  (predict for XP_021318195.1)
Subcellular
localization
TargetP
mito 3  (predict for XP_002446813.1)
mito 3  (predict for XP_002446814.2)
mito 3  (predict for XP_021318190.1)
mito 3  (predict for XP_021318191.1)
mito 3  (predict for XP_021318192.1)
mito 3  (predict for XP_021318193.1)
mito 3  (predict for XP_021318194.1)
mito 3  (predict for XP_021318195.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8082854

.
zma-u.5
for
100280409

.
osa-u.5
for
9268630

.
osa-u.5
for
4351099

.
ath-u.5
for
AT1G09190

.
gma-u.5
for
100805000

.
sly-u.5
for
101247663

.
sly-u.5
for
101244713

.
vvi-u.5
for
100258012

.
mtr-u.5
for
11432005

.
mtr-u.5
for
11407190

.


Ortholog ID: 4040
Species ath gma sly sly osa osa zma bra bra mtr mtr hvu ghi ghi sbi sot sot cit cit bdi nta nta
Symbol AT1G09190 LOC100805000 LOC101244713 LOC101247663 LOC4351099 LOC9268630 LOC100280409 LOC103842597 LOC103871648 LOC11432005 LOC11407190 LOC123446316 LOC107927178 LOC107887002 LOC8082854 LOC102602131 LOC102580133 LOC102621282 LOC102617057 LOC104582647 LOC107783794 LOC107825572
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g09190 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At2g20540 pentatricopeptide repeat-containing protein At1g09190 pentatricopeptide repeat-containing protein At2g20540 uncharacterized LOC100280409 pentatricopeptide repeat-containing protein At2g20540 pentatricopeptide repeat-containing protein At1g09190 pentatricopeptide repeat-containing protein At2g20540 pentatricopeptide repeat-containing protein At1g09190 pentatricopeptide repeat-containing protein At1g09190-like pentatricopeptide repeat-containing protein At1g09190 pentatricopeptide repeat-containing protein At1g09190 pentatricopeptide repeat-containing protein At2g20540 pentatricopeptide repeat-containing protein At1g09190 pentatricopeptide repeat-containing protein At2g20540-like pentatricopeptide repeat-containing protein At2g20540 pentatricopeptide repeat-containing protein At1g09190 pentatricopeptide repeat-containing protein At2g20540-like pentatricopeptide repeat-containing protein At1g09190-like pentatricopeptide repeat-containing protein At2g20540-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
sbi00280 Valine, leucine and isoleucine degradation 2
sbi00410 beta-Alanine metabolism 2
sbi00640 Propanoate metabolism 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03082 ATP-dependent chromatin remodeling 2
nta00906 Carotenoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837439 100805000 101244713 101247663 4351099 9268630 100280409 103842597 103871648 11432005 11407190 123446316 107927178 107887002 8082854 102602131 102580133 102621282 102617057 104582647 107783794 107825572
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