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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11407712   protein RBL 
 mtr-r.5   11407712   protein RBL 
 mtr-m.5   11407712   protein RBL 
 mtr-u.5   25501141   protein RBL 
 mtr-u.5   11409786   protein RBL 
 gma-u.5   100818581   protein RBL 
 gma-u.5   100818094   protein RBL 
 gma-u.5   100816297   protein RBL 
 ppo-u.5   18107985   protein RBL 
 ppo-u.5   7465024   protein RBL 
 ath-u.5   RBL   Transducin/WD40 repeat-like superfamily protein 
 vvi-u.5   100242780   protein RBL 
 ghi-r.1   107935533   protein RBL 
 ghi-r.1   107954465   protein RBL 
 bna-r.1   106345728   protein RBL 
 bna-r.1   106405990   protein RBL 
 cit-r.1   102620582   protein RBL 
 sly-u.5   101252723   protein RBL 
 sot-r.1   102602044   protein RBL 
 nta-r.1   107817105   protein RBL-like 
 nta-r.1   107781895   protein RBL 
 osa-u.5   4332006   protein RBL 
 zma-u.5   100280497   uncharacterized LOC100280497 
 tae-r.2   123093044   protein RBL 
 tae-r.2   123085020   protein RBL 
 tae-r.2   123098325   protein RBL 
 hvu-r.1   123449373   protein RBL 
 sbi-r.1   8081855   protein RBL 
 bdi-r.1   100829872   protein RBL 
 cre-r.1   CHLRE_03g195750v5   uncharacterized protein 

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Top 50 coexpressed genes to 11407712 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11407712 (mtr-u.5 coexpression data)

CoexMap"11407712"


mtrLOC11407712 | Entrez gene ID : 11407712      
Species mtr gma ppo ath vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre bra
Paralog 5 3 2 1 1 2 2 1 1 1 2 1 1 3 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0048188 [list] [network] Set1C/COMPASS complex  (8 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_003628041.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto_nucl 4,  cyto 1  (predict for XP_003628041.1)
Subcellular
localization
TargetP
other 9  (predict for XP_003628041.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11407712
mtr-r.5
for
11407712
mtr-m.5
for
11407712
mtr-u.5
for
25501141
mtr-u.5
for
11409786
gma-u.5
for
100818581
gma-u.5
for
100818094
gma-u.5
for
100816297
ppo-u.5
for
18107985
ppo-u.5
for
7465024
ath-u.5
for
RBL
vvi-u.5
for
100242780
ghi-r.1
for
107935533
ghi-r.1
for
107954465
bna-r.1
for
106345728
bna-r.1
for
106405990
cit-r.1
for
102620582
sly-u.5
for
101252723
sot-r.1
for
102602044
nta-r.1
for
107817105
nta-r.1
for
107781895
osa-u.5
for
4332006
zma-u.5
for
100280497
tae-r.2
for
123093044
tae-r.2
for
123085020
tae-r.2
for
123098325
hvu-r.1
for
123449373
sbi-r.1
for
8081855
bdi-r.1
for
100829872
cre-r.1
for
CHLRE_03g195750v5


Ortholog ID: 7226
Species mtr mtr mtr gma gma gma ppo ppo ath vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC11407712 LOC25501141 LOC11409786 LOC100818581 LOC100816297 LOC100786748 LOC18107985 LOC7465024 RBL LOC100242780 LOC107935533 LOC107954465 LOC106345728 LOC106405990 LOC102620582 LOC101252723 LOC102602044 LOC107817105 LOC107781895 LOC4332006 LOC100280497 LOC123093044 LOC123085020 LOC123098325 LOC123449373 LOC8081855 LOC100829872 CHLRE_03g195750v5
Function* protein RBL protein RBL protein RBL protein RBL protein RBL protein RBL protein RBL protein RBL Transducin/WD40 repeat-like superfamily protein protein RBL protein RBL protein RBL protein RBL protein RBL protein RBL protein RBL protein RBL protein RBL-like protein RBL protein RBL uncharacterized LOC100280497 protein RBL protein RBL protein RBL protein RBL protein RBL protein RBL uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 3
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03440 Homologous recombination 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 5
ppo03015 mRNA surveillance pathway 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03040 Spliceosome 3
nta03020 RNA polymerase 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 9
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11407712 25501141 11409786 100818581 100816297 100786748 18107985 7465024 821658 100242780 107935533 107954465 106345728 106405990 102620582 101252723 102602044 107817105 107781895 4332006 100280497 123093044 123085020 123098325 123449373 8081855 100829872 5718749
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