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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18107985   protein RBL 
 ppo-r.4   18107985   protein RBL 
 ppo-u.5   7465024   protein RBL 
 gma-u.5   100818581   protein RBL 
 gma-u.5   100818094   protein RBL 
 gma-u.5   100816297   protein RBL 
 mtr-u.5   25501141   protein RBL 
 mtr-u.5   11409786   protein RBL 
 mtr-u.5   11407712   protein RBL 
 ath-u.5   RBL   Transducin/WD40 repeat-like superfamily protein 
 vvi-u.5   100242780   protein RBL 
 sly-u.5   101252723   protein RBL 
 osa-u.5   4332006   protein RBL 
 zma-u.5   100280497   uncharacterized LOC100280497 

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Top 50 coexpressed genes to 18107985 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18107985 (ppo-u.5 coexpression data)

CoexMap"18107985"


ppoLOC18107985 | Entrez gene ID : 18107985    
Species ppo gma mtr ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 3 3 3 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0048188 [list] [network] Set1C/COMPASS complex  (11 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_006370892.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto_nucl 4,  nucl 3,  cyto 3,  cysk 2,  chlo 1,  golg 1  (predict for XP_006370892.2)
Subcellular
localization
TargetP
other 8  (predict for XP_006370892.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18107985

.
ppo-r.4
for
18107985

.
ppo-u.5
for
7465024

.
gma-u.5
for
100818581

.
gma-u.5
for
100818094

.
gma-u.5
for
100816297

.
mtr-u.5
for
25501141

.
mtr-u.5
for
11409786

.
mtr-u.5
for
11407712

.
ath-u.5
for
RBL

.
vvi-u.5
for
100242780

.
sly-u.5
for
101252723

.
osa-u.5
for
4332006

.
zma-u.5
for
100280497

.


Ortholog ID: 7226
Species ath gma gma sly osa zma vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol RBL LOC100786748 LOC100818581 LOC101252723 LOC4332006 LOC100280497 LOC100242780 LOC7465024 LOC18107985 LOC11407712 LOC11409786 LOC123093044 LOC123098325 LOC123449373 LOC107954465 LOC107935533 LOC106345728 LOC106405990 CHLRE_03g195750v5 LOC8081855 LOC102602044 LOC102620582 LOC100829872 LOC107781895 LOC107817105
Function* Transducin/WD40 repeat-like superfamily protein protein RBL protein RBL protein RBL protein RBL uncharacterized LOC100280497 protein RBL protein RBL protein RBL protein RBL protein RBL protein RBL protein RBL protein RBL protein RBL protein RBL protein RBL protein RBL uncharacterized protein protein RBL protein RBL protein RBL protein RBL protein RBL protein RBL-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03440 Homologous recombination 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 5
ppo03015 mRNA surveillance pathway 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 3
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03040 Spliceosome 3
nta03020 RNA polymerase 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821658 100786748 100818581 101252723 4332006 100280497 100242780 7465024 18107985 11407712 11409786 123093044 123098325 123449373 107954465 107935533 106345728 106405990 5718749 8081855 102602044 102620582 100829872 107781895 107817105
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