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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11412272   calvin cycle protein CP12-2, chloroplastic 
 mtr-r.5   11412272   calvin cycle protein CP12-2, chloroplastic 
 mtr-m.5   11412272   calvin cycle protein CP12-2, chloroplastic 
 mtr-u.5   11432033   calvin cycle protein CP12-2, chloroplastic 
 gma-u.5   100500679   uncharacterized LOC100500679 
 gma-u.5   100812118   calvin cycle protein CP12-1, chloroplastic 
 gma-u.5   100812168   calvin cycle protein CP12-2, chloroplastic 
 ppo-u.5   7494735   calvin cycle protein CP12-3, chloroplastic 
 ppo-u.5   7495216   calvin cycle protein CP12-2, chloroplastic 
 ppo-u.5   7481401   calvin cycle protein CP12-1, chloroplastic 
 ath-u.5   CP12-1   CP12 domain-containing protein 1 
 ath-u.5   CP12-2   CP12 domain-containing protein 2 
 vvi-u.5   100267103   calvin cycle protein CP12-1, chloroplastic 
 sly-u.5   101267611   calvin cycle protein CP12-1, chloroplastic 
 sly-u.5   101268314   calvin cycle protein CP12-1, chloroplastic 
 osa-u.5   4332603   calvin cycle protein CP12-1, chloroplastic 
 osa-u.5   4325791   calvin cycle protein CP12-1, chloroplastic 
 zma-u.5   100281649   uncharacterized LOC100281649 
 zma-u.5   103634557   calvin cycle protein CP12-1, chloroplastic 

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Top 50 coexpressed genes to 11412272 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11412272 (mtr-u.5 coexpression data)

CoexMap"11412272"


mtrLOC11412272 | Entrez gene ID : 11412272      
Species mtr gma ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 3 3 2 1 2 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0080153 [list] [network] negative regulation of reductive pentose-phosphate cycle  (2 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (642 genes)  IEA  
GO MF
Protein XP_003591401.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for XP_003591401.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_003591401.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11412272
mtr-r.5
for
11412272
mtr-m.5
for
11412272
mtr-u.5
for
11432033
gma-u.5
for
100500679
gma-u.5
for
100812118
gma-u.5
for
100812168
ppo-u.5
for
7494735
ppo-u.5
for
7495216
ppo-u.5
for
7481401
ath-u.5
for
CP12-1
ath-u.5
for
CP12-2
vvi-u.5
for
100267103
sly-u.5
for
101267611
sly-u.5
for
101268314
osa-u.5
for
4332603
osa-u.5
for
4325791
zma-u.5
for
100281649
zma-u.5
for
103634557


Ortholog ID: 2462
Species mtr mtr gma gma ppo ppo ath ath bra bra vvi ghi ghi bna bna cit sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC11412272 LOC11432033 LOC100812118 LOC100803973 LOC7495216 LOC7481401 CP12-2 CP12-1 LOC103842058 LOC103866383 LOC100267103 LOC107945995 LOC107909995 LOC106363667 LOC106451992 LOC102630113 LOC101268314 LOC101267611 LOC102600488 LOC102594918 LOC107799104 LOC142171487 LOC4332603 LOC4325791 LOC100281649 LOC103634557 LOC123097681 LOC123051101 LOC123424399 LOC123448830 LOC8083992 LOC8070767 LOC100830724 LOC100834837 CHLRE_08g380250v5
Function* calvin cycle protein CP12-2, chloroplastic calvin cycle protein CP12-2, chloroplastic calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-2, chloroplastic calvin cycle protein CP12-2, chloroplastic calvin cycle protein CP12-1, chloroplastic CP12 domain-containing protein 2 CP12 domain-containing protein 1 calvin cycle protein CP12-2, chloroplastic calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-2, chloroplastic-like calvin cycle protein CP12-2, chloroplastic calvin cycle protein CP12-2, chloroplastic calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-1, chloroplastic-like calvin cycle protein CP12-1, chloroplastic-like calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-1, chloroplastic uncharacterized LOC100281649 calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-2, chloroplastic-like calvin cycle protein CP12-1, chloroplastic-like calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-2, chloroplastic calvin cycle protein CP12-1, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 2
gma00053 Ascorbate and aldarate metabolism 2
gma00071 Fatty acid degradation 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 11
gma00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 12
ppo00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 10
ath00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 8
ghi00630 Glyoxylate and dicarboxylate metabolism 7
ghi00710 Carbon fixation by Calvin cycle 7
ghi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 7
ghi00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 10
sly00190 Oxidative phosphorylation 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 7
sot00710 Carbon fixation by Calvin cycle 6
sot00630 Glyoxylate and dicarboxylate metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00196 Photosynthesis - antenna proteins 6
osa00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 3
osa00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00195 Photosynthesis 7
cre00190 Oxidative phosphorylation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11412272 11432033 100812118 100803973 7495216 7481401 825414 819353 103842058 103866383 100267103 107945995 107909995 106363667 106451992 102630113 101268314 101267611 102600488 102594918 107799104 142171487 4332603 4325791 100281649 103634557 123097681 123051101 123424399 123448830 8083992 8070767 100830724 100834837 5719874
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