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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8083992   calvin cycle protein CP12-1, chloroplastic 
 zma-u.5   103634557   calvin cycle protein CP12-1, chloroplastic 
 zma-u.5   100281649   uncharacterized LOC100281649 
 osa-u.5   4332603   calvin cycle protein CP12-1, chloroplastic 
 osa-u.5   4325791   calvin cycle protein CP12-1, chloroplastic 
 ath-u.5   CP12-1   CP12 domain-containing protein 1 
 ath-u.5   CP12-2   CP12 domain-containing protein 2 
 gma-u.5   100814289   calvin cycle protein CP12-2, chloroplastic 
 gma-u.5   100812168   calvin cycle protein CP12-2, chloroplastic 
 gma-u.5   100812118   calvin cycle protein CP12-1, chloroplastic 
 sly-u.5   101268314   calvin cycle protein CP12-1, chloroplastic 
 sly-u.5   101267611   calvin cycle protein CP12-1, chloroplastic 
 vvi-u.5   100267103   calvin cycle protein CP12-1, chloroplastic 
 ppo-u.5   7481401   calvin cycle protein CP12-1, chloroplastic 
 ppo-u.5   7495216   calvin cycle protein CP12-2, chloroplastic 
 ppo-u.5   7494735   calvin cycle protein CP12-3, chloroplastic 
 mtr-u.5   11412272   calvin cycle protein CP12-2, chloroplastic 
 mtr-u.5   11432033   calvin cycle protein CP12-2, chloroplastic 

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Top 50 coexpressed genes to 8083992 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8083992 (sbi-r.1 coexpression data)

CoexMap"8083992"


sbiLOC8083992 | Entrez gene ID : 8083992      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 2 2 3 2 1 3 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0080153 [list] [network] negative regulation of reductive pentose-phosphate cycle  (3 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (560 genes)  IEA  
GO MF
Protein XP_002467982.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_002467982.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_002467982.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8083992

.
zma-u.5
for
103634557

.
zma-u.5
for
100281649

.
osa-u.5
for
4332603

.
osa-u.5
for
4325791

.
ath-u.5
for
CP12-1

.
ath-u.5
for
CP12-2

.
gma-u.5
for
100814289

.
gma-u.5
for
100812168

.
gma-u.5
for
100812118

.
sly-u.5
for
101268314

.
sly-u.5
for
101267611

.
vvi-u.5
for
100267103

.
ppo-u.5
for
7481401

.
ppo-u.5
for
7495216

.
ppo-u.5
for
7494735

.
mtr-u.5
for
11412272

.
mtr-u.5
for
11432033

.


Ortholog ID: 2462
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi bdi nta nta
Symbol CP12-2 CP12-1 LOC100812118 LOC100803973 LOC101268314 LOC101267611 LOC4332603 LOC4325791 LOC100281649 LOC103634557 LOC103842058 LOC103866383 LOC100267103 LOC7495216 LOC7481401 LOC11412272 LOC11432033 LOC123097681 LOC123051101 LOC123424399 LOC123448830 LOC107945995 LOC107909995 LOC106363667 LOC106451992 CHLRE_08g380250v5 LOC8083992 LOC8070767 LOC102600488 LOC102594918 LOC102630113 LOC100830724 LOC100834837 LOC107799104 LOC142171487
Function* CP12 domain-containing protein 2 CP12 domain-containing protein 1 calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-2, chloroplastic calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-1, chloroplastic uncharacterized LOC100281649 calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-2, chloroplastic calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-2, chloroplastic calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-2, chloroplastic calvin cycle protein CP12-2, chloroplastic calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-2, chloroplastic-like calvin cycle protein CP12-1, chloroplastic-like calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-2, chloroplastic-like calvin cycle protein CP12-2, chloroplastic uncharacterized protein calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-2, chloroplastic calvin cycle protein CP12-2, chloroplastic calvin cycle protein CP12-1, chloroplastic calvin cycle protein CP12-1, chloroplastic-like calvin cycle protein CP12-1, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 10
ath00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 2
gma00053 Ascorbate and aldarate metabolism 2
gma00071 Fatty acid degradation 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 11
gma00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 10
sly00190 Oxidative phosphorylation 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00196 Photosynthesis - antenna proteins 6
osa00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 3
osa00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 12
ppo00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 8
ghi00630 Glyoxylate and dicarboxylate metabolism 7
ghi00710 Carbon fixation by Calvin cycle 7
ghi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 7
ghi00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00195 Photosynthesis 7
cre00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 7
sot00710 Carbon fixation by Calvin cycle 6
sot00630 Glyoxylate and dicarboxylate metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825414 819353 100812118 100803973 101268314 101267611 4332603 4325791 100281649 103634557 103842058 103866383 100267103 7495216 7481401 11412272 11432033 123097681 123051101 123424399 123448830 107945995 107909995 106363667 106451992 5719874 8083992 8070767 102600488 102594918 102630113 100830724 100834837 107799104 142171487
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