ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
mtr-u.5	11412298	uncharacterized LOC11412298
mtr-r.5	11412298	uncharacterized LOC11412298
mtr-m.5	11412298	uncharacterized LOC11412298
mtr-u.5	25482496	uncharacterized LOC25482496
gma-u.5	100807775	uncharacterized LOC100807775
gma-u.5	100792974	uncharacterized LOC100792974
ppo-u.5	18100151	uncharacterized LOC18100151
ath-u.5	AT2G43630	nucleusenvelope protein
ath-u.5	AT3G59640	glycine-rich protein
bra-r.6	103866095	uncharacterized LOC103866095
bra-r.6	103841809	uncharacterized LOC103841809
vvi-u.5	100264463	uncharacterized LOC100264463
ghi-r.1	107941258	uncharacterized LOC107941258
ghi-r.1	107938571	uncharacterized LOC107938571
ghi-r.1	107934382	uncharacterized LOC107934382
bna-r.1	106429297	uncharacterized LOC106429297
bna-r.1	111198642	uncharacterized LOC111198642
bna-r.1	BNAC04G49110D	uncharacterized BNAC04G49110D
cit-r.1	102621679	hypothetical protein
sly-u.5	101244861	uncharacterized LOC101244861
sot-r.1	102586240	uncharacterized LOC102586240
sot-r.1	102586569	uncharacterized LOC102586569
sot-r.1	107058230	uncharacterized LOC107058230
nta-r.1	107762467	uncharacterized LOC107762467
nta-r.1	107778985	uncharacterized LOC107778985
nta-r.1	107787586	uncharacterized LOC107787586
osa-u.5	4336262	uncharacterized LOC4336262
osa-u.5	4329921	uncharacterized LOC4329921
zma-u.5	100272819	glycine-rich protein
zma-u.5	100193033	uncharacterized LOC100193033
tae-r.2	123045864	uncharacterized LOC123045864
tae-r.2	123053738	uncharacterized LOC123053738
tae-r.2	123127647	uncharacterized LOC123127647
hvu-r.1	123403155	uncharacterized LOC123403155
hvu-r.1	123427092	uncharacterized LOC123427092
sbi-r.1	110436094	uncharacterized LOC110436094
sbi-r.1	8072435	uncharacterized LOC8072435
bdi-r.1	100842576	uncharacterized LOC100842576
bdi-r.1	100837136	uncharacterized LOC100837136

Top 50 coexpressed genes to 11412298 (mtr-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 11412298 (mtr-u.5 coexpression data)

CoexMap"11412298"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0009507 [list] [network] chloroplast

(642 genes)

IEA

GO MF

Protein

XP_003618537.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9

(predict for XP_003618537.2)

Subcellular
localization
TargetP

chlo 7

(predict for XP_003618537.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 11412298	mtr-r.5 for 11412298	mtr-m.5 for 11412298	mtr-u.5 for 25482496	gma-u.5 for 100807775	gma-u.5 for 100792974	ppo-u.5 for 18100151	ath-u.5 for AT2G43630	ath-u.5 for AT3G59640	bra-r.6 for 103866095	bra-r.6 for 103841809	vvi-u.5 for 100264463	ghi-r.1 for 107941258	ghi-r.1 for 107938571	ghi-r.1 for 107934382	bna-r.1 for 106429297	bna-r.1 for 111198642	bna-r.1 for BNAC04G49110D	cit-r.1 for 102621679	sly-u.5 for 101244861	sot-r.1 for 102586240	sot-r.1 for 102586569	sot-r.1 for 107058230	nta-r.1 for 107762467	nta-r.1 for 107778985	nta-r.1 for 107787586	osa-u.5 for 4336262	osa-u.5 for 4329921	zma-u.5 for 100272819	zma-u.5 for 100193033	tae-r.2 for 123045864	tae-r.2 for 123053738	tae-r.2 for 123127647	hvu-r.1 for 123403155	hvu-r.1 for 123427092	sbi-r.1 for 110436094	sbi-r.1 for 8072435	bdi-r.1 for 100842576	bdi-r.1 for 100837136

Ortholog

Ortholog ID: 4704

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC11412298

uncharacterized LOC25482496

uncharacterized LOC100807775

uncharacterized LOC100792974

uncharacterized LOC18100151

nucleusenvelope protein

glycine-rich protein

uncharacterized LOC103866095

uncharacterized LOC103841809

uncharacterized LOC100264463

uncharacterized LOC107941258

uncharacterized LOC107938571

uncharacterized LOC107934382

uncharacterized LOC106429297

uncharacterized BNAC04G49110D

uncharacterized LOC106429521

hypothetical protein

uncharacterized LOC101244861

uncharacterized LOC102586240

uncharacterized LOC102586569

uncharacterized LOC107058230

uncharacterized LOC107762467

uncharacterized LOC107778985

uncharacterized LOC107787586

uncharacterized LOC4336262

uncharacterized LOC4329921

glycine-rich protein

uncharacterized LOC100193033

uncharacterized LOC123127647

uncharacterized LOC123144760

uncharacterized LOC123189616

uncharacterized LOC123403155

uncharacterized LOC123427092

uncharacterized LOC110436094

uncharacterized LOC8072435

uncharacterized LOC100842576

uncharacterized LOC100837136

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00010	Glycolysis / Gluconeogenesis	3
mtr01200	Carbon metabolism	3
mtr01240	Biosynthesis of cofactors	2
mtr00020	Citrate cycle (TCA cycle)	2
mtr00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00860	Porphyrin metabolism	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	4
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3
ppo00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	5
ath03018	RNA degradation	2
ath04626	Plant-pathogen interaction	2
ath03040	Spliceosome	2
ath04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03015	mRNA surveillance pathway	3
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03018	RNA degradation	4
bra03040	Spliceosome	3
bra04141	Protein processing in endoplasmic reticulum	3
bra04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00860	Porphyrin metabolism	3
vvi01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03060	Protein export	2
ghi00230	Purine metabolism	2
ghi00240	Pyrimidine metabolism	2
ghi01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03060	Protein export	2
ghi00230	Purine metabolism	2
ghi00240	Pyrimidine metabolism	2
ghi01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03060	Protein export	2
ghi00230	Purine metabolism	2
ghi00240	Pyrimidine metabolism	2
ghi01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	2
sot04145	Phagosome	2
sot01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	2
nta04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00970	Aminoacyl-tRNA biosynthesis	4
nta03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01240	Biosynthesis of cofactors	3
tae00740	Riboflavin metabolism	2
tae00790	Folate biosynthesis	2
tae03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00620	Pyruvate metabolism	2
hvu00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00230	Purine metabolism	2
bdi01232	Nucleotide metabolism	2
bdi01240	Biosynthesis of cofactors	2
bdi00250	Alanine, aspartate and glutamate metabolism	2
bdi01230	Biosynthesis of amino acids	2

Expression

Expression pattern

Entrez Gene ID^*

11412298

25482496

100807775

100792974

18100151

818965

825133

103866095

103841809

100264463

107941258

107938571

107934382

106429297

106391823

106429521

102621679

101244861

102586240

102586569

107058230

107762467

107778985

107787586

4336262

4329921

100272819

100193033

123127647

123144760

123189616

123403155

123427092

110436094

8072435

100842576

100837136

The preparation time of this page was 0.2 [sec].


Species	mtr	gma	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	1	2	2	1	3	3	1	1	3	3	2	2	3	2	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 11412298 (mtr-u.5 coexpression data)

Top 50 enrichment test to 11412298 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**