Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-m.5   11418011   floral homeotic protein AGAMOUS 
 gma-u.5   AGL1L   agamous-like MADS-box protein AGL1-like 
 gma-u.5   100782733   agamous-like MADS-box protein MADS1 
 gma-u.5   100808734   agamous-like MADS-box protein MADS1 
 ath-u.5   AG   K-box region and MADS-box transcription factor family protein 
 ath-u.5   STK   K-box region and MADS-box transcription factor family protein 
 bra-r.6   103856965   floral homeotic protein AGAMOUS 
 bra-r.6   103862959   agamous-like MADS-box protein AGL1 
 vvi-u.5   AG   agamous 
 vvi-u.5   MADS5   MADS-box protein 5 
 vvi-u.5   MADS1   MAD-box transcripion factor 
 ghi-r.1   107941808   agamous-like MADS-box protein MADS1 
 ghi-r.1   107957499   agamous-like MADS-box protein AGL11 
 ghi-r.1   107904906   agamous-like MADS-box protein AGL11 
 bna-r.1   106428192   agamous-like MADS-box protein AGL1 
 bna-r.1   106436444   agamous-like MADS-box protein AGL11 
 cit-r.1   102617808   agamous-like MADS-box protein MADS1 
 cit-r.1   102620453   agamous-like MADS-box protein AGL11 
 sly-u.5   AG1   floral homeotic protein AGAMOUS 
 sly-u.5   MBP3   agamous-like MADS-box protein MBP3 
 sot-r.1   102586087   floral homeotic protein AGAMOUS 
 nta-r.1   107777063   agamous-like MADS-box protein AGL11 
 osa-u.5   4324888   MADS-box transcription factor 21-like 
 osa-u.5   9271572   MADS-box transcription factor 3-like 
 zma-u.5   542244   homologue of Arabidopsis gene AGAMOUS 
 zma-u.5   542039   MADS-box transcription factor 21 
 zma-u.5   542037   Agamous-like MADS-box protein AGL5 
 tae-r.2   542795   MADS-box transcription factor 58 
 tae-r.2   123041886   MADS-box transcription factor 58 
 tae-r.2   123077697   MADS-box transcription factor 3 
 sbi-r.1   110430121   MADS-box transcription factor 3-like 
 sbi-r.1   8080509   MADS-box transcription factor 3 
 bdi-r.1   100824190   MADS-box transcription factor 58-like 
 bdi-r.1   100841720   MADS-box transcription factor 3 

close


Top 50 coexpressed genes to 11418011 (mtr-m.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 11418011 (mtr-m.5 coexpression data)

CoexMap"11418011"


mtrLOC11418011 | Entrez gene ID : 11418011      
Species mtr gma ath bra vvi ghi bna cit sly sot nta osa zma tae sbi bdi ppo cre hvu
Paralog 1 3 2 2 3 3 2 2 2 1 1 2 3 3 2 2 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (161 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2707 genes)  IEA  
GO MF
GO:0000977 [list] [network] RNA polymerase II transcription regulatory region sequence-specific DNA binding  (259 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (607 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1100 genes)  IEA  
Protein XP_003629877.1 [sequence] [blastp]
XP_024628106.1 [sequence] [blastp]
XP_039684904.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_003629877.1)
nucl 9  (predict for XP_024628106.1)
nucl 9  (predict for XP_039684904.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for XP_003629877.1)
other 8,  chlo 3  (predict for XP_024628106.1)
other 8,  chlo 3  (predict for XP_039684904.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-m.5
for
11418011
gma-u.5
for
AGL1L
gma-u.5
for
100782733
gma-u.5
for
100808734
ath-u.5
for
AG
ath-u.5
for
STK
bra-r.6
for
103856965
bra-r.6
for
103862959
vvi-u.5
for
AG
vvi-u.5
for
MADS5
vvi-u.5
for
MADS1
ghi-r.1
for
107941808
ghi-r.1
for
107957499
ghi-r.1
for
107904906
bna-r.1
for
106428192
bna-r.1
for
106436444
cit-r.1
for
102617808
cit-r.1
for
102620453
sly-u.5
for
AG1
sly-u.5
for
MBP3
sot-r.1
for
102586087
nta-r.1
for
107777063
osa-u.5
for
4324888
osa-u.5
for
9271572
zma-u.5
for
542244
zma-u.5
for
542039
zma-u.5
for
542037
tae-r.2
for
542795
tae-r.2
for
123041886
tae-r.2
for
123077697
sbi-r.1
for
110430121
sbi-r.1
for
8080509
bdi-r.1
for
100824190
bdi-r.1
for
100841720


Ortholog ID: 775
Species gma gma gma ath ath bra bra bra vvi vvi vvi ghi ghi ghi bna bna bna cit cit sly sly sly nta osa osa osa zma zma zma tae tae tae sbi sbi bdi bdi
Symbol LOC100808734 LOC100776263 AGL11 STK SHP1 LOC103856965 LOC103861026 LOC103866661 AG MADS5 MADS1 LOC107904906 LOC107914052 LOC107959674 LOC106428192 LOC106353173 LOC106397223 LOC102620453 LOC102622291 AG1 MBP3 TAGL1 LOC107777063 LOC4324888 LOC9271572 LOC4338067 LOC542244 LOC542039 LOC542037 LOC100136964 LOC100136965 LOC100136998 LOC110430121 LOC8080509 LOC100824190 LOC100841720
Function* agamous-like MADS-box protein MADS1 floral homeotic protein AGAMOUS-like MADS domain transporter AGL11 K-box region and MADS-box transcription factor family protein K-box region and MADS-box transcription factor family protein floral homeotic protein AGAMOUS floral homeotic protein AGAMOUS agamous-like MADS-box protein AGL5 agamous MADS-box protein 5 MAD-box transcripion factor agamous-like MADS-box protein AGL11 agamous-like MADS-box protein AGL11 agamous-like MADS-box protein MADS1 agamous-like MADS-box protein AGL1 agamous-like MADS-box protein AGL1 agamous-like MADS-box protein AGL11 agamous-like MADS-box protein AGL11 agamous-like MADS-box protein MADS1 floral homeotic protein AGAMOUS agamous-like MADS-box protein MBP3 TAGL1 transcription factor agamous-like MADS-box protein AGL11 MADS-box transcription factor 21-like MADS-box transcription factor 3-like MADS-box transcription factor 58-like homologue of Arabidopsis gene AGAMOUS MADS-box transcription factor 21 Agamous-like MADS-box protein AGL5 MADS-box transcription factor 21 MADS-box transcription factor 3 MADS-box transcription factor 21 MADS-box transcription factor 3-like MADS-box transcription factor 3 MADS-box transcription factor 58-like MADS-box transcription factor 3
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00640 Propanoate metabolism 2
ghi00785 Lipoic acid metabolism 2
ghi01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00941 Flavonoid biosynthesis 3
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
sly00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00062 Fatty acid elongation 2
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
zma00010 Glycolysis / Gluconeogenesis 2
zma00053 Ascorbate and aldarate metabolism 2
zma00071 Fatty acid degradation 2
zma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00940 Phenylpropanoid biosynthesis 2
bdi00941 Flavonoid biosynthesis 2
bdi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100808734 100776263 100301905 826586 825047 103856965 103861026 103866661 100261787 100232870 100232864 107904906 107914052 107959674 106428192 106353173 106397223 102620453 102622291 543840 101249093 543841 107777063 4324888 9271572 4338067 542244 542039 542037 100136964 100136965 100136998 110430121 8080509 100824190 100841720
The preparation time of this page was 0.2 [sec].