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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11421922   pentatricopeptide repeat-containing protein At3g59040 
 mtr-r.5   11421922   pentatricopeptide repeat-containing protein At3g59040 
 mtr-m.5   11421922   pentatricopeptide repeat-containing protein At3g59040 
 gma-u.5   100796513   pentatricopeptide repeat-containing protein At3g59040 
 gma-u.5   100786343   pentatricopeptide repeat-containing protein At3g59040 
 ppo-u.5   7478507   pentatricopeptide repeat-containing protein At3g59040 
 ath-u.5   AT3G59040   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103841765   pentatricopeptide repeat-containing protein At3g59040 
 vvi-u.5   100250692   pentatricopeptide repeat-containing protein At3g59040 
 ghi-r.1   107959738   pentatricopeptide repeat-containing protein At3g59040 
 ghi-r.1   107959635   pentatricopeptide repeat-containing protein At3g59040 
 bna-r.1   106368314   pentatricopeptide repeat-containing protein At3g59040 
 bna-r.1   111197864   pentatricopeptide repeat-containing protein At3g59040 
 cit-r.1   102619651   pentatricopeptide repeat-containing protein At3g59040 
 sly-u.5   101251698   pentatricopeptide repeat-containing protein At3g59040 
 sot-r.1   102605894   pentatricopeptide repeat-containing protein At3g59040 
 nta-r.1   107799823   uncharacterized LOC107799823 
 nta-r.1   107778609   pentatricopeptide repeat-containing protein At3g59040-like 
 osa-u.5   4344860   pentatricopeptide repeat-containing protein At3g59040 
 zma-u.5   103641124   pentatricopeptide repeat-containing protein At3g59040 
 tae-r.2   123172480   pentatricopeptide repeat-containing protein At3g59040 
 tae-r.2   123080962   pentatricopeptide repeat-containing protein At3g59040 
 tae-r.2   123063655   pentatricopeptide repeat-containing protein At3g59040 
 hvu-r.1   123445664   pentatricopeptide repeat-containing protein At3g59040 
 sbi-r.1   8071143   pentatricopeptide repeat-containing protein At3g59040 
 bdi-r.1   100837703   pentatricopeptide repeat-containing protein At3g59040 

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Top 50 coexpressed genes to 11421922 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11421922 (mtr-u.5 coexpression data)

CoexMap"11421922"


mtrLOC11421922 | Entrez gene ID : 11421922      
Species mtr gma ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 1 1 1 1 2 2 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006396 [list] [network] RNA processing  (647 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (642 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (294 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_003592720.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_003592720.1)
Subcellular
localization
TargetP
mito 2  (predict for XP_003592720.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11421922
mtr-r.5
for
11421922
mtr-m.5
for
11421922
gma-u.5
for
100796513
gma-u.5
for
100786343
ppo-u.5
for
7478507
ath-u.5
for
AT3G59040
bra-r.6
for
103841765
vvi-u.5
for
100250692
ghi-r.1
for
107959738
ghi-r.1
for
107959635
bna-r.1
for
106368314
bna-r.1
for
111197864
cit-r.1
for
102619651
sly-u.5
for
101251698
sot-r.1
for
102605894
nta-r.1
for
107799823
nta-r.1
for
107778609
osa-u.5
for
4344860
zma-u.5
for
103641124
tae-r.2
for
123172480
tae-r.2
for
123080962
tae-r.2
for
123063655
hvu-r.1
for
123445664
sbi-r.1
for
8071143
bdi-r.1
for
100837703


Ortholog ID: 10832
Species mtr gma gma ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC11421922 LOC100796513 LOC100786343 LOC7478507 AT3G59040 LOC103841765 LOC100250692 LOC107959738 LOC107959635 LOC106368314 LOC111197864 LOC102619651 LOC101251698 LOC102605894 LOC107799823 LOC107778609 LOC4344860 LOC103641124 LOC123172480 LOC123080962 LOC123063655 LOC123445664 LOC8071143 LOC100837703
Function* pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 uncharacterized LOC107799823 pentatricopeptide repeat-containing protein At3g59040-like pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma00561 Glycerolipid metabolism 2
gma00566 Sulfoquinovose metabolism 2
gma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11421922 100796513 100786343 7478507 825073 103841765 100250692 107959738 107959635 106368314 111197864 102619651 101251698 102605894 107799823 107778609 4344860 103641124 123172480 123080962 123063655 123445664 8071143 100837703
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