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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123445664   pentatricopeptide repeat-containing protein At3g59040 
 tae-r.2   123080962   pentatricopeptide repeat-containing protein At3g59040 
 tae-r.2   123063655   pentatricopeptide repeat-containing protein At3g59040 
 tae-r.2   123172480   pentatricopeptide repeat-containing protein At3g59040 
 bdi-r.1   100837703   pentatricopeptide repeat-containing protein At3g59040 
 osa-u.5   4344860   pentatricopeptide repeat-containing protein At3g59040 
 zma-u.5   103641124   pentatricopeptide repeat-containing protein At3g59040 
 sbi-r.1   8071143   pentatricopeptide repeat-containing protein At3g59040 
 ath-u.5   AT3G59040   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100796513   pentatricopeptide repeat-containing protein At3g59040 
 gma-u.5   100786343   pentatricopeptide repeat-containing protein At3g59040 
 sly-u.5   101251698   pentatricopeptide repeat-containing protein At3g59040 
 bra-r.6   103841765   pentatricopeptide repeat-containing protein At3g59040 
 vvi-u.5   100250692   pentatricopeptide repeat-containing protein At3g59040 
 ppo-u.5   7478507   pentatricopeptide repeat-containing protein At3g59040 
 mtr-u.5   11421922   pentatricopeptide repeat-containing protein At3g59040 
 ghi-r.1   107959738   pentatricopeptide repeat-containing protein At3g59040 
 ghi-r.1   107959635   pentatricopeptide repeat-containing protein At3g59040 
 bna-r.1   106368314   pentatricopeptide repeat-containing protein At3g59040 
 bna-r.1   111197864   pentatricopeptide repeat-containing protein At3g59040 
 sot-r.1   102605894   pentatricopeptide repeat-containing protein At3g59040 
 cit-r.1   102619651   pentatricopeptide repeat-containing protein At3g59040 
 nta-r.1   107778609   pentatricopeptide repeat-containing protein At3g59040-like 
 nta-r.1   107799823   uncharacterized LOC107799823 

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Top 50 coexpressed genes to 123445664 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123445664 (hvu-r.1 coexpression data)

CoexMap"123445664"


hvuLOC123445664 | Entrez gene ID : 123445664    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 1 1 1 2 1 1 1 1 1 2 2 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4692 genes)  IEA  
Protein XP_044978617.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 3  (predict for XP_044978617.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_044978617.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123445664
tae-r.2
for
123080962
tae-r.2
for
123063655
tae-r.2
for
123172480
bdi-r.1
for
100837703
osa-u.5
for
4344860
zma-u.5
for
103641124
sbi-r.1
for
8071143
ath-u.5
for
AT3G59040
gma-u.5
for
100796513
gma-u.5
for
100786343
sly-u.5
for
101251698
bra-r.6
for
103841765
vvi-u.5
for
100250692
ppo-u.5
for
7478507
mtr-u.5
for
11421922
ghi-r.1
for
107959738
ghi-r.1
for
107959635
bna-r.1
for
106368314
bna-r.1
for
111197864
sot-r.1
for
102605894
cit-r.1
for
102619651
nta-r.1
for
107778609
nta-r.1
for
107799823


Ortholog ID: 10832
Species hvu tae tae tae bdi osa zma sbi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC123445664 LOC123080962 LOC123063655 LOC123172480 LOC100837703 LOC4344860 LOC103641124 LOC8071143 AT3G59040 LOC100796513 LOC100786343 LOC101251698 LOC103841765 LOC100250692 LOC7478507 LOC11421922 LOC107959738 LOC107959635 LOC106368314 LOC111197864 LOC102605894 LOC102619651 LOC107778609 LOC107799823
Function* pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040 pentatricopeptide repeat-containing protein At3g59040-like uncharacterized LOC107799823
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma00561 Glycerolipid metabolism 2
gma00566 Sulfoquinovose metabolism 2
gma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123445664 123080962 123063655 123172480 100837703 4344860 103641124 8071143 825073 100796513 100786343 101251698 103841765 100250692 7478507 11421922 107959738 107959635 106368314 111197864 102605894 102619651 107778609 107799823
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