Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11423979   transcription initiation factor TFIID subunit 12b 
 mtr-r.5   11423979   transcription initiation factor TFIID subunit 12b 
 mtr-m.5   11423979   transcription initiation factor TFIID subunit 12b 
 mtr-u.5   112417486   uncharacterized protein DDB_G0285291 
 gma-u.5   100783017   transcription initiation factor TFIID subunit 12b 
 ppo-u.5   7478108   transcription initiation factor TFIID subunit 12b 
 ppo-u.5   7478355   transcription initiation factor TFIID subunit 12b 
 ath-u.5   EER4   Transcription initiation factor TFIID subunit A 
 vvi-u.5   100248501   transcription initiation factor TFIID subunit 12b 
 sly-u.5   101258141   transcription initiation factor TFIID subunit 12b 
 sly-u.5   101245068   transcription initiation factor TFIID subunit 12b-like 
 osa-u.5   4327470   transcription initiation factor TFIID subunit 12b 
 zma-u.5   100275267   uncharacterized LOC100275267 
 zma-u.5   100383633   transcription associated factor1 

close


Top 50 coexpressed genes to 11423979 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 11423979 (mtr-u.5 coexpression data)

CoexMap"11423979"


mtrLOC11423979 | Entrez gene ID : 11423979      
Species mtr gma ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 2 1 1 2 1 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0051123 [list] [network] RNA polymerase II preinitiation complex assembly  (10 genes)  IEA  
GO:0006352 [list] [network] DNA-templated transcription initiation  (78 genes)  IEA  
GO CC
GO:0000124 [list] [network] SAGA complex  (19 genes)  IEA  
GO:0005669 [list] [network] transcription factor TFIID complex  (19 genes)  IEA  
GO MF
GO:0017025 [list] [network] TBP-class protein binding  (12 genes)  IEA  
GO:0046982 [list] [network] protein heterodimerization activity  (128 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2104 genes)  IEA  
Protein XP_003627263.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 4  (predict for XP_003627263.3)
Subcellular
localization
TargetP
chlo 8,  other 4  (predict for XP_003627263.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11423979

.
mtr-r.5
for
11423979

.
mtr-m.5
for
11423979

.
mtr-u.5
for
112417486

.
gma-u.5
for
100783017

.
ppo-u.5
for
7478108

.
ppo-u.5
for
7478355

.
ath-u.5
for
EER4

.
vvi-u.5
for
100248501

.
sly-u.5
for
101258141

.
sly-u.5
for
101245068

.
osa-u.5
for
4327470

.
zma-u.5
for
100275267

.
zma-u.5
for
100383633

.


Ortholog ID: 4819
Species ath gma sly sly osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sot sot cit bdi bdi nta nta
Symbol EER4 LOC100783017 LOC101245068 LOC101258141 LOC4327470 LOC100275267 LOC100383633 LOC103872529 LOC103842750 LOC100248501 LOC7478355 LOC7478108 LOC112417486 LOC11423979 LOC123062588 LOC123079746 LOC123404452 LOC123444903 LOC107897435 LOC107913860 LOC125574961 LOC106430279 LOC8060089 LOC102593833 PPS7 LOC102628367 LOC100821508 LOC100821588 LOC107827222 LOC107772958
Function* Transcription initiation factor TFIID subunit A transcription initiation factor TFIID subunit 12b transcription initiation factor TFIID subunit 12b-like transcription initiation factor TFIID subunit 12b transcription initiation factor TFIID subunit 12b uncharacterized LOC100275267 transcription associated factor1 transcription initiation factor TFIID subunit 12b transcription initiation factor TFIID subunit 12b transcription initiation factor TFIID subunit 12b transcription initiation factor TFIID subunit 12b transcription initiation factor TFIID subunit 12b uncharacterized protein DDB_G0285291 transcription initiation factor TFIID subunit 12b transcription initiation factor TFIID subunit 12b transcription initiation factor TFIID subunit 12b transcription initiation factor TFIID subunit 12b-like transcription initiation factor TFIID subunit 12b transcription initiation factor TFIID subunit 12b transcription initiation factor TFIID subunit 12b transcription initiation factor TFIID subunit 12b-like transcription initiation factor TFIID subunit 12b transcription initiation factor TFIID subunit 12b transcription initiation factor TFIID subunit 12b-like transcription initiation factor TFIID subunit 12b-like transcription initiation factor TFIID subunit 12b transcription initiation factor TFIID subunit 12b transcription initiation factor TFIID subunit 12b transcription initiation factor TFIID subunit 12b transcription initiation factor TFIID subunit 12b-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
zma03022 Basal transcription factors 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
ppo03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
tae03022 Basal transcription factors 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 6
tae04136 Autophagy - other 4
tae03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 4
ghi00071 Fatty acid degradation 2
ghi00410 beta-Alanine metabolism 2
ghi00592 alpha-Linolenic acid metabolism 2
ghi00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 4
ghi03082 ATP-dependent chromatin remodeling 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
bna03010 Ribosome 4
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna00970 Aminoacyl-tRNA biosynthesis 4
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 3
sot03250 Viral life cycle - HIV-1 2
sot03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00562 Inositol phosphate metabolism 2
cit04141 Protein processing in endoplasmic reticulum 2
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00540 Lipopolysaccharide biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03022 Basal transcription factors 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838316 100783017 101245068 101258141 4327470 100275267 100383633 103872529 103842750 100248501 7478355 7478108 112417486 11423979 123062588 123079746 123404452 123444903 107897435 107913860 125574961 106430279 8060089 102593833 102604481 102628367 100821508 100821588 107827222 107772958
The preparation time of this page was 0.1 [sec].