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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11427762   protein SHORT ROOT IN SALT MEDIUM 1 
 mtr-r.5   11427762   protein SHORT ROOT IN SALT MEDIUM 1 
 mtr-m.5   11427762   protein SHORT ROOT IN SALT MEDIUM 1 
 gma-u.5   100784665   protein SHORT ROOT IN SALT MEDIUM 1 
 gma-u.5   100790366   protein SHORT ROOT IN SALT MEDIUM 1 
 ppo-u.5   18102644   protein SHORT ROOT IN SALT MEDIUM 1 
 ath-u.5   emb1579   ATP/GTP-binding protein family 
 bra-r.6   117131712   protein SHORT ROOT IN SALT MEDIUM 1-like 
 bra-r.6   103839424   protein SHORT ROOT IN SALT MEDIUM 1 
 vvi-u.5   100260241   protein SHORT ROOT IN SALT MEDIUM 1 
 ghi-r.1   121228123   protein SHORT ROOT IN SALT MEDIUM 1-like 
 ghi-r.1   107898725   protein SHORT ROOT IN SALT MEDIUM 1 
 ghi-r.1   107934907   protein SHORT ROOT IN SALT MEDIUM 1 
 bna-r.1   106393993   protein SHORT ROOT IN SALT MEDIUM 1 
 bna-r.1   106417107   protein SHORT ROOT IN SALT MEDIUM 1 
 cit-r.1   102607752   protein SHORT ROOT IN SALT MEDIUM 1 
 sly-u.5   101251176   protein SHORT ROOT IN SALT MEDIUM 1 
 sot-r.1   102604348   cell division cycle and apoptosis regulator protein 1 
 nta-r.1   107802770   protein SHORT ROOT IN SALT MEDIUM 1 
 nta-r.1   107807000   protein SHORT ROOT IN SALT MEDIUM 1 
 osa-u.5   4341311   protein SHORT ROOT IN SALT MEDIUM 1 
 zma-u.5   103639973   protein SHORT ROOT IN SALT MEDIUM 1 
 zma-u.5   103629816   protein SHORT ROOT IN SALT MEDIUM 1 
 tae-r.2   123148008   protein SHORT ROOT IN SALT MEDIUM 1 
 tae-r.2   123092378   protein SHORT ROOT IN SALT MEDIUM 1 
 tae-r.2   123085650   protein SHORT ROOT IN SALT MEDIUM 1 
 hvu-r.1   123448844   protein SHORT ROOT IN SALT MEDIUM 1-like 
 hvu-r.1   123407379   protein SHORT ROOT IN SALT MEDIUM 1-like 
 sbi-r.1   8076726   cell division cycle and apoptosis regulator protein 1 
 bdi-r.1   100829458   uncharacterized LOC100829458 
 bdi-r.1   100840292   cell division cycle and apoptosis regulator protein 1 
 cre-r.1   CHLRE_06g283634v5   uncharacterized protein 

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Top 50 coexpressed genes to 11427762 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11427762 (mtr-u.5 coexpression data)

CoexMap"11427762"


mtrLOC11427762 | Entrez gene ID : 11427762      
Species mtr gma ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 1 1 2 1 3 2 1 1 1 2 1 2 3 2 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1635 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2707 genes)  IEA  
GO MF
GO:0005509 [list] [network] calcium ion binding  (278 genes)  IEA  
Protein XP_003613873.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 4  (predict for XP_003613873.2)
Subcellular
localization
TargetP
mito 8,  other 4  (predict for XP_003613873.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11427762
mtr-r.5
for
11427762
mtr-m.5
for
11427762
gma-u.5
for
100784665
gma-u.5
for
100790366
ppo-u.5
for
18102644
ath-u.5
for
emb1579
bra-r.6
for
117131712
bra-r.6
for
103839424
vvi-u.5
for
100260241
ghi-r.1
for
121228123
ghi-r.1
for
107898725
ghi-r.1
for
107934907
bna-r.1
for
106393993
bna-r.1
for
106417107
cit-r.1
for
102607752
sly-u.5
for
101251176
sot-r.1
for
102604348
nta-r.1
for
107802770
nta-r.1
for
107807000
osa-u.5
for
4341311
zma-u.5
for
103639973
zma-u.5
for
103629816
tae-r.2
for
123148008
tae-r.2
for
123092378
tae-r.2
for
123085650
hvu-r.1
for
123448844
hvu-r.1
for
123407379
sbi-r.1
for
8076726
bdi-r.1
for
100829458
bdi-r.1
for
100840292
cre-r.1
for
CHLRE_06g283634v5


Ortholog ID: 6479
Species mtr gma gma ppo ath bra bra vvi ghi ghi ghi bna bna cit sly sot nta nta osa zma zma tae tae tae hvu hvu sbi bdi bdi cre
Symbol LOC11427762 LOC100784665 LOC100790366 LOC18102644 emb1579 LOC117131712 LOC103839424 LOC100260241 LOC121228123 LOC107898725 LOC107934907 LOC106393993 LOC106417107 LOC102607752 LOC101251176 LOC102604348 LOC107802770 LOC107807000 LOC4341311 LOC103639973 LOC103629816 LOC123092378 LOC123085650 LOC123155880 LOC123448844 LOC123407379 LOC8076726 LOC100829458 LOC100840292 CHLRE_06g283634v5
Function* protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1 ATP/GTP-binding protein family protein SHORT ROOT IN SALT MEDIUM 1-like protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1-like protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1 cell division cycle and apoptosis regulator protein 1 protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1 protein SHORT ROOT IN SALT MEDIUM 1-like protein SHORT ROOT IN SALT MEDIUM 1-like cell division cycle and apoptosis regulator protein 1 uncharacterized LOC100829458 cell division cycle and apoptosis regulator protein 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
ath03040 Spliceosome 2
ath03015 mRNA surveillance pathway 2
ath03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 6
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 3
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
nta03018 RNA degradation 2
nta04075 Plant hormone signal transduction 2
nta00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03040 Spliceosome 4
tae03430 Mismatch repair 2
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11427762 100784665 100790366 18102644 814844 117131712 103839424 100260241 121228123 107898725 107934907 106393993 106417107 102607752 101251176 102604348 107802770 107807000 4341311 103639973 103629816 123092378 123085650 123155880 123448844 123407379 8076726 100829458 100840292 66053774
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