ATTED-II : GeneCoexpression result

Species	Gene	Description
mtr-u.5	11428288	RING-H2 finger protein ATL8
mtr-r.5	11428288	RING-H2 finger protein ATL8
mtr-m.5	11428288	RING-H2 finger protein ATL8
mtr-u.5	11411600	RING-H2 finger protein ATL80
mtr-u.5	11405802	RING-H2 finger protein ATL8
gma-u.5	100813341	RING-H2 finger protein ATL8
gma-u.5	100786769	RING-H2 finger protein ATL8
gma-u.5	100787383	RING-H2 finger protein ATL8
ppo-u.5	7471753	RING-H2 finger protein ATL8
ppo-u.5	7492116	RING-H2 finger protein ATL8
ath-u.5	RHA3A	RING-H2 finger A3A
ath-u.5	ATL8	RING/U-box superfamily protein
vvi-u.5	100266753	RING-H2 finger protein ATL8
vvi-u.5	100260977	RING-H2 finger protein ATL80
sly-u.5	101254466	RING-H2 finger protein ATL80
sly-u.5	101264584	RING-H2 finger protein ATL8-like
sly-u.5	101265820	RING-H2 finger protein ATL80
osa-u.5	4347807	probable E3 ubiquitin-protein ligase ATL44
osa-u.5	4330352	RING-H2 finger protein ATL80
osa-u.5	9266473	RING-H2 finger protein ATL80
zma-u.5	100284205	uncharacterized LOC100284205
zma-u.5	100283712	RING-H2 finger protein ATL1R
zma-u.5	100280547	RING-H2 finger protein ATL2A

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_003629097.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, E.R. 2, vacu 1, cyto_E.R. 1

(predict for XP_003629097.1)

Subcellular
localization
TargetP

other 4, chlo 3

(predict for XP_003629097.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 11428288	mtr-r.5 for 11428288	mtr-m.5 for 11428288	mtr-u.5 for 11411600	mtr-u.5 for 11405802	gma-u.5 for 100813341	gma-u.5 for 100786769	gma-u.5 for 100787383	ppo-u.5 for 7471753	ppo-u.5 for 7492116	ath-u.5 for RHA3A	ath-u.5 for ATL8	vvi-u.5 for 100266753	vvi-u.5 for 100260977	sly-u.5 for 101254466	sly-u.5 for 101264584	sly-u.5 for 101265820	osa-u.5 for 4347807	osa-u.5 for 4330352	osa-u.5 for 9266473	zma-u.5 for 100284205	zma-u.5 for 100283712	zma-u.5 for 100280547

Ortholog

Ortholog ID: 374

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

RHA3B

Function^*

RING-H2 finger protein ATL80

RING-H2 finger protein ATL8

RING-H2 finger A3B

RING/U-box superfamily protein

RING-H2 finger protein ATL8

probable E3 ubiquitin-protein ligase ATL44

RING-H2 finger protein ATL8

RING-H2 finger protein ATL80

RING-H2 finger protein ATL80-like

RING-H2 finger protein ATL80

RING-H2 finger protein ATL8-like

RING-H2 finger protein ATL80

RING-H2 finger protein ATL8-like

RING-H2 finger protein ATL80

RING-H2 finger protein ATL8

RING-H2 finger protein ATL80-like

RING-H2 finger protein ATL80

uncharacterized LOC100284205

RING-H2 finger protein ATL1R

RING-H2 finger protein ATL74

probable E3 ubiquitin-protein ligase ATL44

RING-H2 finger protein ATL74

probable E3 ubiquitin-protein ligase ATL45

probable E3 ubiquitin-protein ligase ATL44

RING-H2 finger protein ATL80

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00250	Alanine, aspartate and glutamate metabolism	4
gma01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04820	Cytoskeleton in muscle cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	2
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03060	Protein export	2
nta03082	ATP-dependent chromatin remodeling	2
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	4
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	3
tae04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00500	Starch and sucrose metabolism	3

Expression

Expression pattern

Entrez Gene ID^*

11411600

11428288

100813341

100786769

7492116

7471753

829700

838674

103832100

103845949

100266753

100260977

107917879

107922003

111210253

102610566

101248283

101254466

102600767

102579592

107807258

107765274

9266473

4330352

100284205

100283712

123042069

123451909

8060446

8066387

100822098

100829815

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 11428288 (mtr-u.5 coexpression data)

Top 50 enrichment test to 11428288 (mtr-u.5 coexpression data)


Species	mtr	gma	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	5	3	2	2	2	3	3	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 11428288 (mtr-u.5 coexpression data)

Top 50 enrichment test to 11428288 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**