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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11440704   proteasome subunit alpha type-6 
 mtr-r.5   11440704   proteasome subunit alpha type-6 
 mtr-m.5   11440704   proteasome subunit alpha type-6 
 mtr-u.5   25502559   proteasome subunit alpha type-6 
 gma-u.5   PAA1   proteasome subunit alpha type-6 
 gma-u.5   100803124   proteasome subunit alpha type-6 
 ppo-u.5   18100319   proteasome subunit alpha type-6 
 ppo-u.5   7472490   proteasome subunit alpha type-6 
 ppo-u.5   7484640   proteasome subunit alpha type-6 
 ath-u.5   PAA2   20S proteasome subunit PAA2 
 ath-u.5   PAA1   proteasome alpha subunit A1 
 vvi-u.5   100261826   proteasome subunit alpha type-6 
 sly-u.5   101250370   proteasome subunit alpha type-6 
 osa-u.5   4343891   proteasome subunit alpha type-6 
 osa-u.5   4331828   proteasome subunit alpha type-6-like 
 zma-u.5   100191154   uncharacterized LOC100191154 
 zma-u.5   542021   maize 20S proteasome alpha subunit 

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Top 50 coexpressed genes to 11440704 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11440704 (mtr-u.5 coexpression data)

CoexMap"11440704"


mtrLOC11440704 | Entrez gene ID : 11440704      
Species mtr gma ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 2 3 2 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG mtr03050 [list] [network] Proteasome (60 genes)
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (368 genes)  IEA  
GO CC
GO:0019773 [list] [network] proteasome core complex, alpha-subunit complex  (11 genes)  IEA  
GO:0005839 [list] [network] proteasome core complex  (26 genes)  IEA  
GO MF
Protein XP_003595788.1 [sequence] [blastp]
XP_024631737.1 [sequence] [blastp]
XP_039686531.1 [sequence] [blastp]
XP_039686532.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 8,  nucl 1,  cysk_nucl 1  (predict for XP_003595788.1)
cyto 8,  nucl 1,  cysk_nucl 1  (predict for XP_024631737.1)
cyto 8,  nucl 1,  cysk_nucl 1  (predict for XP_039686531.1)
cyto 8,  nucl 1,  cysk_nucl 1  (predict for XP_039686532.1)
Subcellular
localization
TargetP
other 8,  mito 5  (predict for XP_003595788.1)
other 8,  mito 5  (predict for XP_024631737.1)
other 8,  mito 5  (predict for XP_039686531.1)
other 8,  mito 5  (predict for XP_039686532.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11440704
mtr-r.5
for
11440704
mtr-m.5
for
11440704
mtr-u.5
for
25502559
gma-u.5
for
PAA1
gma-u.5
for
100803124
ppo-u.5
for
18100319
ppo-u.5
for
7472490
ppo-u.5
for
7484640
ath-u.5
for
PAA2
ath-u.5
for
PAA1
vvi-u.5
for
100261826
sly-u.5
for
101250370
osa-u.5
for
4343891
osa-u.5
for
4331828
zma-u.5
for
100191154
zma-u.5
for
542021


Ortholog ID: 4672
Species mtr mtr gma gma ppo ppo ath ath bra bra vvi ghi ghi bna bna cit cit sly sot nta nta osa osa zma zma tae hvu sbi bdi cre
Symbol LOC11440704 LOC25502559 LOC100803124 PAA1 LOC18100319 LOC7472490 PAA2 PAA1 LOC103828507 LOC103860359 LOC100261826 LOC107893369 LOC107901053 LOC106439770 LOC106389415 LOC102610983 LOC102619245 LOC101250370 LOC102582717 LOC107815705 LOC107824016 LOC4331828 LOC4343891 LOC542021 LOC100191154 LOC123098662 LOC123449611 LOC8082013 LOC100835050 CHLRE_17g705400v5
Function* proteasome subunit alpha type-6 proteasome subunit alpha type-6 proteasome subunit alpha type-6 proteasome subunit alpha type-6 proteasome subunit alpha type-6 proteasome subunit alpha type-6 20S proteasome subunit PAA2 proteasome alpha subunit A1 proteasome subunit alpha type-6-B proteasome subunit alpha type-6-B proteasome subunit alpha type-6 proteasome subunit alpha type-6 proteasome subunit alpha type-6-like proteasome subunit alpha type-6-B proteasome subunit alpha type-6-B-like proteasome subunit alpha type-6 proteasome subunit alpha type-6 proteasome subunit alpha type-6 proteasome subunit alpha type-6 proteasome subunit alpha type-6 proteasome subunit alpha type-6-like proteasome subunit alpha type-6-like proteasome subunit alpha type-6 maize 20S proteasome alpha subunit uncharacterized LOC100191154 proteasome subunit alpha type-6 proteasome subunit alpha type-6 proteasome subunit alpha type-6 proteasome subunit alpha type-6 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 15
gma03040 Spliceosome 4
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 14
gma03040 Spliceosome 6
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 14
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 15
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 16
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 18
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 15
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 13
ghi01230 Biosynthesis of amino acids 4
ghi00030 Pentose phosphate pathway 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 11
ghi00220 Arginine biosynthesis 2
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 19
bna03060 Protein export 2
bna04141 Protein processing in endoplasmic reticulum 2
bna04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 16
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 4
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 11
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 6
nta00240 Pyrimidine metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 6
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 14
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 15
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 8
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 18
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11440704 25502559 100803124 732640 18100319 7472490 815135 833524 103828507 103860359 100261826 107893369 107901053 106439770 106389415 102610983 102619245 101250370 102582717 107815705 107824016 4331828 4343891 542021 100191154 123098662 123449611 8082013 100835050 5717219
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